SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene14937

Length: 943 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene14937

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Lipid transfer protein n=2 Tax=Picea RepID=O22110_PICAB	-	-	1.0e-39	52%
FL-Next	tr=Lipid transfer protein; Picea abies (Norway spruce) (Picea excelsa).	-	-	0.0	70%
Blast2go	lipid binding	-	-	2.6528e-39	70%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor	IPR003612	-	2.6528e-39	70%
Blast2go	Plant lipid transfer protein/hydrophobic protein helical domain	IPR013770	-	2.6528e-39	70%
Blast2go	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	IPR016140	-	2.6528e-39	70%

Full-Lengther Next Prediction

SNPs (tot: 6)

Position	A %	C %	G %	T %	Probability
738		85		14	0.993533
839	51	48			1.0
842	53		46		1.0
879	2	36		60	1.0
901	13	86			0.999973
944	20	40		20	1.0

SSRs (tot: 1)

Start position	End position	Sequence	Length
115	133	ATTTTG ATTTTG ATTTTG A	19

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain