SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene14871

Length: 945 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene14871

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Ubiquitin carrier protein n=1 Tax=Arachis hypogaea RepID=Q5UAG0_ARAHY	-	-	77%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	100%
Blast2go	ubiquitin-conjugating enzyme-like protein	-	-	94%

Source	GOs	Term	Type	Identity
Blast2go	regulation of protein metabolic process	GO:0051246	Biological Process	94%
Blast2go	post-translational protein modification	GO:0043687	Biological Process	94%
Blast2go	small conjugating protein ligase activity	GO:0019787	Molecular Function	94%

Source	InterPros	Term	Type	Identity
Blast2go	Ubiquitin-conjugating enzyme, E2	IPR000608	-	94%
Blast2go	Ubiquitin-conjugating enzyme/RWD-like	IPR016135	-	94%
Blast2go	Ubiquitin-conjugating enzyme, active site	IPR023313	-	94%

Full-Lengther Next Prediction

SNPs (tot: 4)

Position	A %	C %	G %	T %	Probability
183	85		14		0.99543
192		85		14	0.99543
883	88	11			0.923564
899			16	66	0.988813

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain