SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene14860

Length: 757 nt

Origin of reads: Biogeco_1 Biogeco_2 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene14860

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Predicted protein n=3 Tax=Physcomitrella patens subsp. patens RepID=A9RDX1_PHYPA	-	-	7.0e-20	72%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	98%
Blast2go	protein transport protein sec61 gamma subunit	-	-	7.43881e-22	96%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein targeting	GO:0006605	Biological Process	7.43881e-22	96%
Blast2go	P-P-bond-hydrolysis-driven protein transmembrane transporter activity	GO:0015450	Molecular Function	7.43881e-22	96%
Blast2go	membrane	GO:0016020	Cellular Component	7.43881e-22	96%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Protein translocase complex, SecE/Sec61-gamma subunit	IPR001901	-	7.43881e-22	96%
Blast2go	Protein translocase SEC61 complex, gamma subunit	IPR008158	-	7.43881e-22	96%
Blast2go	Protein translocase SecE domain	IPR023391	-	7.43881e-22	96%

Full-Lengther Next Prediction

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
198	90			10	0.999898
471	14		85		0.999981
535		85		14	0.993533
597	80			20	0.995493
598	20			80	0.995493
629	50		50		1.0
632	20		10		0.999998
633	30		50		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain