SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene14833

Length: 812 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene14833

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Cytochrome c oxidase copper chaperone n=2 Tax=Zea mays RepID=B6TDC7_MAIZE	-	-	5.0e-20	61%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	81%
Blast2go	cytochrome c oxidase copper chaperone family protein	-	-	1.70929e-30	83%

Source	GOs	Term	Type	e value	Identity
Blast2go	copper ion transport	GO:0006825	Biological Process	1.70929e-30	83%
Blast2go	response to copper ion	GO:0046688	Biological Process	1.70929e-30	83%
Blast2go	response to bacterium	GO:0009617	Biological Process	1.70929e-30	83%
Blast2go	copper chaperone activity	GO:0016531	Molecular Function	1.70929e-30	83%
Blast2go	mitochondrial intermembrane space	GO:0005758	Cellular Component	1.70929e-30	83%
Blast2go	plastid	GO:0009536	Cellular Component	1.70929e-30	83%

Full-Lengther Next Prediction

SNPs (tot: 6)

Position	A %	C %	G %	T %	Probability
271		66	33		0.997452
433	81		18		1.0
515		75	25		1.0
651		8		92	0.999718
680		16		83	1.0
797		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain