SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene14731

Length: 1647 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene14731

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	N6-DNA-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9SE56_RICCO	-	-	54%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	90%
Blast2go	methylase family protein	-	-	66%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring one-carbon groups, Methyltransferases.	EC:2.1.1.-	-	0.0	66%

Source	KEGGs	Term	Identity
Blast2go	Ubiquinone and other terpenoid-quinone biosynthesis	00130	66%
Blast2go	Tetracycline biosynthesis	00253	66%
Blast2go	Histidine metabolism	00340	66%
Blast2go	Tyrosine metabolism	00350	66%
Blast2go	Phenylalanine metabolism	00360	66%
Blast2go	Tryptophan metabolism	00380	66%
Blast2go	Benzoxazinoid biosynthesis	00402	66%
Blast2go	Selenocompound metabolism	00450	66%
Blast2go	Biosynthesis of 12-, 14- and 16-membered macrolides	00522	66%
Blast2go	Polycyclic aromatic hydrocarbon degradation	00624	66%
Blast2go	Methane metabolism	00680	66%
Blast2go	Porphyrin and chlorophyll metabolism	00860	66%
Blast2go	Carotenoid biosynthesis	00906	66%
Blast2go	Phenylpropanoid biosynthesis	00940	66%
Blast2go	Flavonoid biosynthesis	00941	66%
Blast2go	Anthocyanin biosynthesis	00942	66%
Blast2go	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	66%
Blast2go	Isoquinoline alkaloid biosynthesis	00950	66%
Blast2go	Insect hormone biosynthesis	00981	66%
Blast2go	Biosynthesis of type II polyketide products	01057	66%
Blast2go	Biosynthesis of alkaloids derived from shikimate pathway	01063	66%
Blast2go	Metabolic pathways	01100	66%
Blast2go	Biosynthesis of secondary metabolites	01110	66%

Source	GOs	Term	Type	Identity
Blast2go	methylation	GO:0032259	Biological Process	66%
Blast2go	methyltransferase activity	GO:0008168	Molecular Function	66%
Blast2go	plastid	GO:0009536	Cellular Component	66%

Source	InterPros	Term	Type	Identity
Blast2go	DNA methylase, N-6 adenine-specific, conserved site	IPR002052	-	66%
Blast2go	Modification methylase HemK	IPR004556	-	66%
Blast2go	Methyltransferase small	IPR007848	-	66%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: D5AD10

Fln msg:

Fln protein: MGESECGMASALRQAATAAIGLCCNSSPPLKIRSAASNFFCCSTPIYTRPFLNFIPPYSSRKSPFPLTLNAQTVSTLTETVEEAVKLQVPLFERPTIFSTCSEDLLNWRKWAQDLANSVGTKLLEADGGPDSEDLLREIEWLLEDAVDEYSPNLATMEAPVTLNMRTSVENLYSLWSDRVEKRRPFQYIVGCSHWRDVVLSVQEGVLIPRPVTEELIQIAQKAIATDGSLARGVWADLGTGSGALAIGLARLLDTEGHVVAVDLSHVALAIARYNVQRYELQARVEVRQGSWFLPLQDVNGKLAGVLSNPPYIPEDQIPGLQAEVGKHEPRLALNGGREGIEDLLHLCRGCISALRSGGFLGFETNGGRQAEALADWLLCNSDSSFRDVQIIADYAGIPRFVTAFRR*

Protein Length: 409

Fln nts: _-_ATGGGGGAGTCTGAATGCGGGATGGCCTCAGCTCTCAGGCAGGCAGCCACCGCTGCAATTGGGCTGTGCTGCAATTCATCACCCCCTTTGAAAATCCGATCTGCAGCGTCAAATTTCTTCTGTTGCTCGACACCGATATATACTCGCCCATTCCTAAACTTCATTCCTCCATATTCATCAAGAAAGTCACCATTTCCTCTTACATTAAATGCCCAAACAGTATCCACATTAACAGAAACTGTGGAGGAAGCGGTAAAGCTTCAAGTTCCTCTGTTCGAAAGACCAACCATCTTCTCGACATGTTCAGAAGACCTTCTAAATTGGAGAAAATGGGCTCAGGACTTGGCAAACTCAGTTGGGACCAAGCTTTTGGAGGCTGATGGGGGCCCTGATTCCGAGGACTTATTGAGAGAGATTGAATGGCTTCTGGAGGATGCAGTAGATGAGTATTCTCCAAATTTGGCGACGATGGAGGCCCCTGTCACTTTGAATATGAGAACGAGTGTTGAGAACTTGTATTCACTGTGGAGTGATAGAGTAGAGAAAAGAAGGCCATTTCAGTATATTGTAGGCTGTTCGCATTGGAGAGATGTGGTGCTGTCCGTGCAAGAAGGGGTTCTGATTCCTAGGCCAGTGACGGAAGAACTGATACAAATAGCCCAAAAGGCAATTGCTACAGATGGGTCATTGGCTAGAGGGGTGTGGGCTGATTTGGGCACTGGGAGTGGTGCCCTTGCCATAGGCCTGGCACGGTTACTAGACACAGAAGGTCACGTAGTGGCAGTGGATCTCAGCCATGTTGCCCTAGCCATTGCTCGCTACAATGTGCAGAGATATGAACTGCAGGCTAGAGTAGAGGTGAGACAGGGTTCATGGTTCCTCCCATTGCAAGATGTTAATGGAAAACTTGCTGGTGTGCTCAGTAATCCACCATATATCCCAGAGGATCAAATTCCTGGGTTACAAGCAGAGGTTGGTAAACATGAGCCGAGGTTGGCTCTAAATGGAGGCCGAGAAGGTATTGAAGATCTTCTACACCTATGCAGAGGGTGCATCTCTGCACTACGTTCTGGTGGATTTCTTGGCTTTGAGACAAATGGGGGAAGGCAGGCAGAGGCACTTGCAGATTGGTTGCTCTGTAACTCAGACAGTAGCTTTCGGGATGTGCAAATTATAGCAGACTATGCTGGCATACCTCGTTTTGTGACTGCTTTTCGTCGCTGA___GCCATTGGAATGGTCAAATGTTGCTACTTTTATTTAACATAATGATTTTCTTCAAAAGCAAAGGAGTTGGGATTGAAAGAAGTTTAGTTATGCACGTTTAATCATCAAAACAATAAAGCCAATGTTGATCATGAAAAATGTTGAAGAAAGTCCATGCATTCATCCCAAGAAACACTGAATGAGAGATCTCATAGGAGATGCATGTAAACACATTTTTGTAGGTGAAAGATTGAGCCTTCATGCTATAATGAATTCTGCTTTTCCTCATTGATGGGGTCTGCCTTGAATATTGCTTGATATCATTTATTGCGAAGGTATCTTCTTCGTCCTTTATTCCTATTGTATATTAGATAATGGGATCCTTCAGTGTGTCAATGTTATCTTCATGATTTCGTGGAGTGCTGCCAACATACCTAGTGATAT

Fln Alignment:

sp_v1.1_unigene14731___MASALRQAATAAIGLCCNSSPPLKIRSAASNFFCCSTPIYTRPFLNFIPPYSSRKSPFPLTLNAQTVSTLTETVEEAVKLQVPLFERPTIFSTCSEDLLNWRKWAQDLANSVGTKLLEADGGPDSEDLLREIEWLLEDAVDEYSPNLATMEAPVTLNMRTSVENLYSLWSDRVEKRRPFQYIVGCSHWRDVVLSVQEGVLIPRPVTEELIQIAQKAIATDGSLARGVWADLGTGSGALAIGLARLLDTEGHVVAVDLSHVALAIARYNVQRYELQARVEVRQGSWFLPLQDVNGKLAGVLSNPPYIPEDQIPGLQAEVGKHEPRLALNGGREGIEDLLHLCRGCISALRSGGFLGFETNGGRQAEALADWLLCNSDSSFRDVQIIADYAGIPRFVTAFR
D5AD10_______________MASALRQTAIAAIGLCYSSLPPMKIQSTASNFFRCSTRRYTHSFLTFTPPYSLRNAPFPPTLNAQTVSTITETVEEVVKLQVPLFERPPIFSTCSEDLLKWRKWAQDLANSVGSKYLEADGGPDSEDLLREIEWLLEDAVDEYSPNLATFEAPITLNMRTSVEDLYSLWSDRVEKRRPFQYIVGCSHWRDVVLSVQEGVLIPRPVTEELIEIAQKAIATDGSLATGVWADLGTGSGALAIGLAQLLDPEGHVVAVDLSHVALSIARYNVQRYELQARVEVRQGSWFLPLQDVNGKLAGVLSNPPYIPEDQIPGLQAEVGKHEPRLALNGGQEGIEDLLHLCRGCISALRSGGFLGFETNGERQADALADLLSCKSDSSFRDVQIIADYAGIPRFVTAFR

SNPs (tot: 31)

Position	A %	C %	G %	T %	Probability
203		33		66	0.997452
323		75		25	0.996473
494		14		85	0.993533
495	85		14		0.993533
498	85			14	0.993533
501	85	14			0.993533
503			85	14	0.993533
504	85			14	0.993533
508		14		85	0.993533
511	85			14	0.993533
512		14	85		0.993533
513	71		28		1.0
514	85			14	0.993533
516	14			85	0.993533
654		83	16		0.994512
725	20		80		0.995493
901	87		12		0.992554
906	87		12		0.992554
938		25		75	1.0
1016	87		12		0.992554
1056	87		12		0.992554
1057		37		62	1.0
1069	12		87		0.992554
1105		12	87		0.992554
1145		87	12		0.992554
1298	37		62		1.0
1340		46		53	1.0
1398	63		36		1.0
1449		41		58	1.0
1475	36			63	1.0
1542		28		71	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain