SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene14687

Length: 890 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene14687

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	pyruvate dehydrogenase, putative (EC:2.7.11.2); K00898 pyruvate dehydrogenase kinase [EC:2.7.11.2]	-	-	65%
FL-Next	tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss).	-	-	72%
Blast2go	pyruvate dehydrogenase kinase	-	-	82%

Source	ECs	Term	Type	e value	Identity
Blast2go	[Pyruvate dehydrogenase (acetyl-transferring)] kinase.	EC:2.7.11.2	-	0.0	82%

Source	ECs	Term	Type	e value	Identity
AutoFact	[Pyruvate dehydrogenase (acetyl-transferring)] kinase.	EC:2.7.11.2	-	0.0	65%

Source	GOs	Term	Type	Identity
Blast2go	peptidyl-histidine phosphorylation	GO:0018106	Biological Process	82%
Blast2go	signal transduction	GO:0007165	Biological Process	82%
Blast2go	histidine phosphotransfer kinase activity	GO:0009927	Molecular Function	82%
Blast2go	two-component sensor activity	GO:0000155	Molecular Function	82%
Blast2go	ATP binding	GO:0005524	Molecular Function	82%
Blast2go	pyruvate dehydrogenase (acetyl-transferring) kinase activity	GO:0004740	Molecular Function	82%
Blast2go	mitochondrion	GO:0005739	Cellular Component	82%

Source	InterPros	Term	Type	e value	Identity
Blast2go	ATPase-like, ATP-binding domain	IPR003594	-	0.0	82%
Blast2go	Branched-chain alpha-ketoacid dehydrogenase kinase/Pyruvate dehydrogenase kinase, N-terminal	IPR018955	-	0.0	82%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: tr_plants

Fln subject: D8RGP6

Fln msg: Distance to subject end: 115 aas, your sequence is shorter than subject: 251 - 368

Fln protein: MTRLVEAFSKTLVNDIHKCSLMKQTGVSLKYMMDFGSKPTERNLLLSAQFLHKELPIRLAHRVVELENLPYGLSSKLPVLKVRDWYVDSFRDIRYFPEIRDSIDDLNFTEMIGRVKMRHNNVVPTMGMGVQQLKQDLGQKIGLNDLPEIHQFLDGFYMSRIGIRMLIGQHVALHDPNPQPGYIGLICTRTSPMQVAESAIDDARSMCVQSYASAPVVHVYGDPSFTFPYVPTHLHLMVFEMVKNSLRAVQE

Protein Length: 252

Fln nts: ATGGGGGATAGTTACAGTTTTACTAGTTATCCTCTTGAAAAGCGTCTGGGGAAGAGCAGACTGGGGACGGCATCCCATTCTCCTTTGTTTTTAGACTGATGGCCTATGTGTGGCGAATAGCACAGTGAAAACGGCC_-_ATGACAAGGCTGGTAGAAGCATTTTCAAAAACTCTGGTGAACGACATTCACAAATGCAGCTTAATGAAGCAGACGGGCGTGTCCCTCAAGTACATGATGGACTTCGGTTCGAAACCCACTGAGAGAAATCTTCTCCTCTCCGCCCAATTTCTCCACAAAGAGCTCCCCATAAGGCTGGCTCACAGGGTCGTTGAGCTCGAGAATTTACCCTACGGCCTGTCCTCCAAGCTCCCCGTTTTAAAGGTCCGTGATTGGTATGTAGATTCATTCCGAGATATCCGTTATTTTCCAGAGATTCGTGACTCCATCGACGACTTAAATTTCACGGAAATGATTGGCCGAGTGAAAATGCGACATAATAATGTCGTTCCGACCATGGGCATGGGTGTCCAGCAGCTCAAACAGGATTTAGGCCAGAAAATAGGCCTGAACGACCTGCCGGAGATTCACCAGTTCTTAGACGGCTTCTACATGTCTCGTATTGGCATCAGAATGCTTATAGGCCAGCATGTCGCATTGCATGATCCCAATCCTCAGCCAGGCTATATTGGCCTCATTTGTACTCGGACATCTCCTATGCAAGTAGCAGAAAGCGCTATTGACGATGCTCGGTCCATGTGTGTGCAGTCATATGCAAGTGCACCAGTGGTGCATGTTTATGGAGATCCGAGCTTCACATTTCCATATGTCCCGACACATTTACACTTGATGGTGTTTGAGATGGTAAAGAATTCTCTTCGTGCAGTTCAGGAGC

Fln Alignment:

sp_v1.1_unigene14687___AMTRLVEAFSKTLVNDIHKCSLMKQTGVSLKYMMDFGSKPTERNLLLSAQFLHKELPIRLAHRVVELENLPYGLSSKLPVLKVRDWYVDSFRDIRYFPEIRDSIDDLNFTEMIGRVKMRHNNVVPTMGMGVQQLKQDLGQKIGLNDLPEIHQFLDGFYMSRIGIRMLIGQHVALHDPNPQPGYIGLICTRTSPMQVAESAIDDARSMCVQSYASAPVVHVYGDPSFTFPYVPTHLHLMVFEMVKNSLRAVQE
D8RGP6_______________AVRRLAETLSRSLVDDIYKCSNMKQTGVSLKYMMDFGANPTEKSLLLSSQFLHKELPVRLAHRVMELDNLPYGLSEKAPVLKVRDWYVDSFKDLRTFPEIQDAADEMKFTDLIHQIKIRHNNVTPTVAMGVQELKEELGRRGGLLELPEIHQFLDRFYMSRIGIRMLIGQHVALHQPNPAPGYIGLISTRVSPVLIAQNAIDDARSACMRTYGSAPEVHVYGDPNFAFAYVPTHLHQMLFELLKNSLRAVQE

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
755		40		60	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain