SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene14682

Length: 1091 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene14682

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ribosomal protein L30 family protein; K02907 large subunit ribosomal protein L30	-	-	4.0e-29	69%
FL-Next	tr=Ribosomal protein L30 family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).	-	-	0.0	71%
Blast2go	structural constituent of ribosome	-	-	1.83063e-29	75%

Source	GOs	Term	Type	e value	Identity
Blast2go	ribosome biogenesis	GO:0042254	Biological Process	1.83063e-29	75%
Blast2go	structural constituent of ribosome	GO:0003735	Molecular Function	1.83063e-29	75%
Blast2go	large ribosomal subunit	GO:0015934	Cellular Component	1.83063e-29	75%
Blast2go	plastid	GO:0009536	Cellular Component	1.83063e-29	75%

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	T %	Probability
860		20	80	0.999996
1048	33	66		0.997452
1050		33	66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain