SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene14589

Length: 1850 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene14589

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Malonyl-CoA:ACP transacylase 1-3 n=3 Tax=Arachis hypogaea RepID=D8KXY7_ARAHY	-	-	84%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	92%
Blast2go	malonyl- :acyl carrier protein transacylase	-	-	88%

Source	ECs	Term	Type	e value	Identity
Blast2go	[Acyl-carrier-protein] S-malonyltransferase.	EC:2.3.1.39	-	0.0	88%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Fatty acid biosynthesis	00061		0.0	88%
Blast2go	Metabolic pathways	01100		0.0	88%

Source	GOs	Term	Type	Identity
Blast2go	fatty acid biosynthetic process	GO:0006633	Biological Process	88%
Blast2go	[acyl-carrier-protein] S-malonyltransferase activity	GO:0004314	Molecular Function	88%
Blast2go	binding	GO:0005488	Molecular Function	88%
Blast2go	chloroplast stroma	GO:0009570	Cellular Component	88%
Blast2go	mitochondrion	GO:0005739	Cellular Component	88%

Source	InterPros	Term	Type	Identity
Blast2go	Acyl transferase domain	IPR001227	-	88%
Blast2go	Malonyl CoA-acyl carrier protein transacylase, FabD-type	IPR004410	-	88%
Blast2go	Acyl transferase	IPR014043	-	88%
Blast2go	Acyl transferase/acyl hydrolase/lysophospholipase	IPR016035	-	88%
Blast2go	Malonyl-CoA ACP transacylase, ACP-binding	IPR016036	-	88%
Blast2go	Polyketide synthase, acyl transferase domain	IPR020801	-	88%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LKV3

Fln msg:

Fln protein: MHICGLGRFGLKMSTAMSCGFTPSRLQSASSLSKPSASVSAGLPSANSSHSAVLLRKSLNPLSSQLVVHGDRSGHRWVERRSCSSRPCTMMSSNTSVGTETFTSTGDALFADYKPTSAFLFPGQGAQAMGMGKDSQSVPAAALLFTKANEILGYDLLDLCLNGPKEKLDSTVISQPAIYVTSLAAVEILRARNGGHDIIDSVDVACGLSLGEYTALAFAGSFSFEDGLKLVKLRGEAMQEASDAAQSAMVGVIGLDAEKVQMLCDAANEEVNDEDRVQIANYLCPGNYAVSGGMKGVEMVEAKAKSFKARMTVRLAVAGAFHTCFMEPAVSRLEAALAATEIRTPRIPVISNVDAQPHSDPATIKKILARQLTSPVQWETTVKTLLGKGLKNSYELGPGKVIAGILKRIDKTTSIENVSA*

Protein Length: 422

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATTTTTGCTGAGCGATACAGCGAATTGAAGGAAAGCCACGCATAATTTGATTTTATGAGCATTCCCTTTGTAACAGTCGCATTTGCTTCTTTCTAATTCAACCACCCTGAAGTACATCGCACCATCATTGAACGTATCGCCCCTGCCTTTCACATCATCCATTCCCACACCTGTGCAGATCAATTCAGTCCCTACTGAGCTCCGTTTATTTT_-_ATGCACATTTGTGGGTTGGGACGATTTGGTTTGAAAATGTCTACAGCAATGTCATGTGGGTTCACACCCAGCAGGCTGCAATCTGCATCGAGTCTTTCAAAACCTTCGGCTTCTGTAAGTGCAGGTCTTCCATCGGCCAACAGTAGCCATAGTGCCGTTTTGTTGAGAAAGAGCTTAAATCCATTGAGTTCGCAGTTGGTGGTACACGGTGATAGGAGTGGTCACAGATGGGTAGAGAGGAGAAGTTGCAGCTCAAGGCCGTGCACGATGATGAGTTCCAATACAAGTGTGGGTACAGAGACATTCACATCCACTGGTGATGCTCTATTTGCAGACTACAAACCCACCTCAGCTTTCCTCTTTCCTGGCCAGGGTGCACAAGCTATGGGAATGGGCAAGGATTCACAAAGTGTGCCTGCTGCTGCTCTTCTATTTACAAAAGCAAATGAGATACTGGGGTATGACCTTCTAGATTTGTGTCTTAATGGACCCAAGGAGAAACTGGACTCAACAGTTATAAGCCAGCCTGCAATATATGTGACAAGCTTGGCTGCAGTTGAGATATTGCGAGCTCGTAATGGAGGCCACGATATAATTGATTCTGTCGATGTGGCATGTGGGCTAAGCCTGGGCGAGTATACAGCGCTTGCATTTGCTGGTTCCTTCAGCTTTGAGGATGGGCTCAAGCTTGTCAAGCTCAGAGGTGAAGCAATGCAAGAAGCATCAGATGCAGCTCAAAGTGCCATGGTCGGTGTTATTGGCCTTGATGCAGAGAAGGTTCAAATGCTCTGTGATGCCGCTAATGAGGAAGTTAATGATGAGGATAGAGTGCAGATCGCGAATTACCTTTGTCCTGGAAACTATGCAGTTTCAGGGGGAATGAAAGGAGTGGAAATGGTAGAGGCAAAGGCTAAGTCATTCAAAGCACGGATGACGGTTCGACTGGCTGTAGCTGGTGCTTTTCACACTTGCTTTATGGAGCCGGCTGTTTCAAGGCTGGAAGCAGCCCTAGCGGCAACAGAGATTAGGACCCCTAGAATTCCAGTCATATCAAATGTTGATGCTCAACCACATTCAGATCCTGCCACAATAAAGAAGATTCTAGCCCGTCAGTTGACATCTCCAGTCCAATGGGAAACTACAGTGAAGACTCTCCTTGGCAAGGGGCTGAAGAATAGTTATGAGTTAGGTCCTGGCAAGGTTATTGCAGGTATACTGAAGAGAATTGACAAGACAACTTCTATTGAGAATGTGAGTGCATAG___ATAAGATTACAATACCACCAATATGTGTTTCTCTTGAAACGCATCCACATTAGGCTCTTGAAATCTGTATAATTTTCTTTGGGAACAATTTTTGGTAGTTAACTCAGCATTCATTGCAAAATTTGATTCCTATCCTGCATTGTCCACTGGGCATGGGGAAACATGTCCGTCTTTACATACTTTCTACAAACATTGTTTCGTGGTCAATGTTTTGGAGAATTGTTTGATGTCAGTATTGGTATTGACAGAAAATCTCCTAGGTTAATGCTCAAATGTATTAATATTCAATTTGTTTTTCCATTTTTTCACAAGCATGTTAAACTTACATGTTGATGAATAACGGCTTGCCTA

Fln Alignment:

sp_v1.1_unigene14589___MHICGLGRFGLKMSTAMSCGFTPSRLQXXXXXXXXXXXXXXGLPSANSSHSAVLLRKSLNPLSSQLVVHGDRSGHRWVERRSCSSRPCTMMSSNTSVGTETFTSTGDALFADYKPTSAFLFPGQGAQAMGMGKDSQSVPAAALLFTKANEILGYDLLDLCLNGPKEKLDSTVISQPAIYVTSLAAVEILRARNGGHDIIDSVDVACGLSLGEYTALAFAGSFSFEDGLKLVKLRGEAMQEASDAAQSAMVGVIGLDAEKVQMLCDAANEEVNDEDRVQIANYLCPGNYAVSGGMKGVEMVEAKAKSFKARMTVRLAVAGAFHTCFMEPAVSRLEAALAATEIRTPRIPVISNVDAQPHSDPATIKKILARQLTSPVQWETTVKTLLGKGLKNSYELGPGKVIAGILKRIDKTTSIENVSA
B8LKV3_______________MHICGLERFGLKMSTAMSCAFTPSRLQSASSLSKPSSYVGVGPSSAKSSHSAVLLRKSLNPLSSQLVIHGVRSGHKWVERRGCSSRVCTMMSSNTSVGTETLTSAGDALFADYKPTSAFLFPGQGAQAVGMGKDSQSVPAAALLFAKANEILGYDLLDLCLNGPKEKLDSTVISQPAIYVTSLAAVEILRARNGGQDVIDSVDVACGLSLGEYTALAFAGSFSFEDGLKLVKLRGEAMQEASDAAQSAMVSVIGLDAEKVQTLCDAANEEVNDENRVQIANYLCTGNYAVSGGIKGVEVVETKAKSFKARMTVRLAVAGAFHTRFMEPAVSRLEAALAATEIRTPRIPVISNVDAQPHSDPATIKKILARQVTSPVQWETTVKTLLGKGLKNSYELGPGKVIAGILKRIDKTASIENVSA

SNPs (tot: 28)

Position	A %	C %	G %	T %	Probability
141		14		85	0.993533
167		42		57	1.0
213	88	11			0.923564
217		87	12		0.992554
218		87		12	0.992554
219			12	87	0.992554
223			87	12	0.992554
224	87		12		0.992554
228		85		14	0.993533
230	14		85		0.993533
231		14		85	0.993533
233		14		85	0.993533
263			40	60	1.0
401			25	75	0.996473
406	75			25	0.996473
407	75		25		0.996473
409		25	75		0.996473
413		25		75	0.996473
494	66	33			0.997452
826	11	88			0.923564
1011	87		12		0.992554
1012	12		87		0.992554
1171	16		83		0.994512
1173	16	83			0.994512
1541		95		4	0.997218
1696		12	88		1.0
1741		11		88	0.999952
1776		13	86		0.999973

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain