SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene14538

Length: 795 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene14538

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Magnesium chelatase H subunit n=4 Tax=rosids RepID=D5KXY0_VITVI	-	-	87%
FL-Next	tr=Putative uncharacterized protein; Zea mays (Maize).	-	-	89%
Blast2go	magnesium chelatase h subunit	-	-	97%

Source	ECs	Term	Type	e value	Identity
Blast2go	Cobaltochelatase.	EC:6.6.1.2	-	0.0	97%

Source	KEGGs	Term	Type	Identity
Blast2go	Porphyrin and chlorophyll metabolism	00860		97%
Blast2go	Metabolic pathways	01100		97%
Blast2go	Magnesium chelatase.	EC:6.6.1.1	-	97%

Source	KEGGs	Term	Identity
Blast2go	Porphyrin and chlorophyll metabolism	00860	97%
Blast2go	Metabolic pathways	01100	97%
Blast2go	Biosynthesis of secondary metabolites	01110	97%

Source	GOs	Term	Type	Identity
Blast2go	chlorophyll biosynthetic process	GO:0015995	Biological Process	97%
Blast2go	RNA processing	GO:0006396	Biological Process	97%
Blast2go	cobaltochelatase activity	GO:0051116	Molecular Function	97%
Blast2go	3'-5'-exoribonuclease activity	GO:0000175	Molecular Function	97%
Blast2go	magnesium chelatase activity	GO:0016851	Molecular Function	97%
Blast2go	RNA binding	GO:0003723	Molecular Function	97%

Source	InterPros	Term	Type	e value	Identity
Blast2go	CobN/magnesium chelatase	IPR003672	-	0.0	97%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: C0PEK8

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 183 aas, your sequence is shorter than subject: 262 - 494

Fln protein: ITVFSFPPDKGNVGTAAYLNVFSSIFSVLQELKKDGYNVEGLPDTSEALIEDIIHDKEAKFNSPNLNIAYKMNVREYQQLTPYAKALEENWGKPPGNLNSDGENLLVYGKQFGNVFIGVQPTFGYEGDPMRLLFAKSASPHHGFAAYYSFLDKIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNIYYYAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELIASYQSLKDSGRGTQIVKQYH*

Protein Length: 263

Fln nts: CCATAACTGTATTTAGCTTCCCACCTGACAAAGGCAATGTTGGCACTGCAGCCTACCTCAATGTATTCTCTTCAATTTTCAGTGTATTACAGGAACTAAAGAAAGATGGCTATAATGTAGAAGGTTTGCCAGATACTTCTGAAGCACTGATTGAAGACATAATTCATGATAAAGAAGCTAAGTTCAACAGCCCAAATCTTAATATTGCTTACAAAATGAATGTGAGAGAGTACCAACAGCTCACACCTTATGCTAAGGCTTTGGAAGAAAACTGGGGTAAGCCTCCAGGGAACCTTAATTCTGATGGGGAGAACCTGCTTGTATATGGAAAACAGTTTGGCAATGTTTTCATTGGAGTGCAACCAACTTTCGGATATGAAGGCGATCCAATGAGGCTTCTTTTTGCAAAATCAGCAAGTCCACACCATGGATTTGCTGCTTATTACTCATTTTTGGATAAAATCTTTAAAGCCGATGCTGTCTTGCATTTTGGAACTCATGGATCCCTGGAATTTATGCCTGGCAAGCAGGTGGGGATGAGTGATGTGTGTTACCCAGACAGTTTGATAGGAAATATCCCCAACATATACTACTATGCTGCAAACAATCCTTCTGAAGCTACTATAGCCAAACGCCGCAGTTATGCCAATACAATAAGTTACCTGACACCTCCAGCAGAGAATGCTGGCTTATACAAAGGTTTAAAACAGCTGAGTGAACTCATAGCTTCATACCAGTCACTGAAGGACAGTGGAAGAGGCACACAGATAGTCAAACAGTATCATTAGTACTGCT

Fln Alignment:

sp_v1.1_unigene14538___ITVFSFPPDKGNVGTAAYLNVFSSIFSVLQELKKDGYNVEGLPDTSEALIEDIIHDKEAKFNSPNLNIAYKMNVREYQQLTPYAKALEENWGKPPGNLNSDGENLLVYGKQFGNVFIGVQPTFGYEGDPMRLLFAKSASPHHGFAAYYSFLDKIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGXXXXXXXXXXXXXSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELIASYQSLKDSGRGTQIV
C0PEK8_______________ITVFSFPPDKGNVGTAAYLNVFSSIYSVLSDLKKDGYNVEGLPDTPEALIEEVIHDKEAQFNSPNLNVAYRMNVREYQALTSYASLLEENWGKPPGHLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLLSKSASPHHGFAAYYTFVEKIFQADAVLNFGTHGSLEFMPGKQVGMSDACYPDSLIGNIPNIYYYAANNPSEATVAKRRSYANTISYLTPPAENAGLYKGLKQLAELISSYQSLKDTGRGPQIV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain