SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene14537

Length: 1220 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene14537

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	calmodulin-binding transcription activator (camta), plants, putative	-	-	6.0e-08	54%
FL-Next	sp=Calmodulin-binding transcription activator 3; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	21%
Blast2go	PREDICTED: hypothetical protein [Vitis vinifera]	-	-	3.46598e-11	52%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q8GSA7

Fln msg: Distance to subject end: 595 aas, your sequence is shorter than subject: 406 - 1032

Fln protein: MFNSSAHRFFARTKRYASSPCISEWNGPTHSSEFEEVESGDDVCVALSVEAESSSAEQGSSRQCLNRKEDLVVDSRVYQPQSYLKAPTNLLAENNVSYSLFNVNEVAPGQYSFLGLEQSEQGNFSEHIDESQLNMTFQNTHDYSNGENLHLIHSQSLSGCNYSGMETKNVDIGANEIDNGHGINLSTWTEVLELCKTGVQNATDETKVPCLQSMTREDNVRRQTNIPMETFVINELSKGQQAYSDNRLQAFTREDVSINVEQVGSHKKFTSNSMLGVHQQQMTGPGYGFVDACEQKKSIVRDSEEAKESTYQHNYHEKNHQTHNNDNSQLSQNEYSVKLEAENGSLENPFYPQISKHCSSEAGRQEGLKKMDSFGRWMSREIGGDGEDSLVVSDSSKYWNSLENQN

Protein Length: 407

Fln nts: TCATGTTCAACTCAAGTGCACACAGATTCTTCGCTCGCACAAAACGTTATGCTTCAAGTCCCTGCATATCTGAATGGAATGGGCCAACTCACTCTTCAGAATTTGAAGAAGTTGAATCTGGGGATGATGTTTGTGTGGCTCTATCGGTTGAAGCTGAATCCTCTTCAGCAGAACAAGGATCTAGTCGGCAATGTCTGAATAGAAAGGAGGATTTGGTCGTAGACTCTAGAGTTTACCAACCTCAGTCATATTTGAAGGCACCTACAAACTTGTTAGCAGAAAATAATGTGAGTTATAGTCTCTTCAATGTAAATGAAGTTGCCCCTGGACAATATTCATTCCTTGGATTAGAACAATCAGAACAAGGAAACTTTTCTGAGCATATTGATGAAAGTCAATTGAATATGACTTTTCAAAATACACATGACTACAGCAATGGAGAAAACCTACACCTGATACACAGCCAAAGTTTGTCAGGATGCAATTATTCAGGCATGGAAACCAAGAATGTGGATATTGGGGCCAATGAAATTGATAATGGGCATGGCATCAACTTATCTACTTGGACAGAGGTGTTAGAGCTCTGCAAAACTGGTGTTCAGAATGCTACTGATGAGACAAAGGTCCCTTGCTTGCAATCTATGACCAGGGAGGATAATGTTAGAAGACAGACAAATATTCCGATGGAAACTTTTGTCATCAATGAGCTGAGCAAAGGACAGCAAGCCTATTCAGATAATCGTCTTCAAGCTTTCACAAGAGAAGATGTCTCTATCAATGTGGAGCAGGTGGGTTCTCATAAGAAATTTACATCAAATTCCATGCTGGGTGTACATCAACAGCAGATGACAGGCCCAGGATATGGATTTGTGGATGCTTGTGAACAAAAGAAATCAATTGTTAGAGATTCAGAGGAGGCAAAAGAGTCCACATATCAGCACAATTATCATGAAAAGAATCATCAAACACATAATAATGACAATTCTCAGCTTTCCCAAAATGAATATTCTGTGAAATTGGAGGCTGAGAATGGGTCTCTTGAAAATCCATTTTACCCTCAGATTTCAAAGCACTGCTCATCTGAGGCTGGAAGACAAGAGGGGTTGAAGAAAATGGACAGTTTTGGGCGATGGATGAGTAGAGAAATTGGTGGTGATGGAGAGGACTCATTGGTGGTATCTGATTCCAGTAAGTATTGGAACTCACTTGAGAATCAAAAT

Fln Alignment:

sp_v1.1_unigene14537___SFLGLEQSEQGNFSEHIDESQLNMTFQNTHDYSNGENLHLIHSQSLSGCNYSGMETKNVDIGANEIDNGHGINLSTWTEVLELCKTGVQNATDETKVPCLQSMTREDNVRRQTNIPM--------ETFVINELSKGQQAYSDNRLQAFTREDVSINVEQVGSHKKFTSNSMLGVHQQQMTGPGYGFVDACEQKKSIVRDSEEAKES--TYQHNYHEKNHQTHNNDNSQLSQNEYSVKLEAENGSLENPFYPQISKHCSSEAGRQEGLKKMDSFGRWMSREIG-----GDGEDSLVVSDSSKYWNSLENQN
Q8GSA7_______________SFNRMQRTEDAARSPQETGDALTSEHDGYASCSFNQNDHSNHSQTTDSASVNGFHSPELE-DAESAYNQHGSSTAYSHQELQQPATG-GNLTGFDPYYQISLTPRDSYQKELRTIPVTDSSIMVDKSKTINSPGVTNGLKNRKSIDSQTWEEILGNCGSGVEALPLQPNSEHEVLDQILES-SFTMQDFASLQESMVKSQNQELNSGLTSDRTVWFQGQDMELNAISNLASNEKA------------PYLSTMKQHLLHGALGEEGLKKMDSFNRWMSKELGDVGVIADANESFTQSSSRTYWEEVESED

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain