SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene14402

Length: 599 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene14402

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	RIN13; RIN13 (RPM1 INTERACTING PROTEIN 13)	-	-	2.0e-12	45%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	42%
Blast2go	rin13 (rpm1 interacting protein 13)	-	-	1.84753e-12	63%

Source	GOs	Term	Type	e value	Identity
Blast2go	defense response to bacterium	GO:0042742	Biological Process	1.84753e-12	63%
Blast2go	plant-type hypersensitive response	GO:0009626	Biological Process	1.84753e-12	63%

Full-Lengther Next Prediction

SNPs (tot: 20)

Position	A %	C %	G %	T %	Probability
9	33			66	0.997452
10		33	66		0.997452
12	66			33	0.997452
13	66			33	0.997452
14	66		33		0.997452
15	66		33		0.997452
16		33		66	0.997452
18			33	66	0.997452
21	33	66			0.997452
22		33		66	0.997452
99	33			66	0.997452
103	66		33		0.997452
174		87		12	1.0
178	2	10	87		1.0
180	10		90		1.0
182		90	10		1.0
183	10	90			1.0
186			90	10	1.0
547			25	75	0.996473
548			75	25	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain