SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene14293

Length: 1340 nt

Origin of reads: Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene14293

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Anthocyanidin synthase n=1 Tax=Ginkgo biloba RepID=B2M0X8_GINBI	-	-	45%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	83%
Blast2go	anthocyanidin synthase	-	-	68%

Source	GOs	Term	Type	e value	Identity
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	0.0	68%
Blast2go	oxidoreductase activity	GO:0016491	Molecular Function	0.0	68%

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: A9NLF0

Fln msg: Separated hits, possible frame ERROR between 145 and 153, query STOP codon is far from subject stop. Distance to subject end: 17 aas, your sequence is shorter than subject: 349 - 365

Fln protein: MLASSKVMAVLEKRAISRVQTLAESGIQTVPAEFVRQVDKALVxxxxLHVPIIDLQGLSLLPRHHDQNHTIAAQISDAAEKWGFFLIINHGVADSLIARVQATSRAFFQLPIEEKEAYASEPKNPIGYGSKLGYSDGEDKSDWRDFYYNGLWPPATREMTKWPIQVYDFTEAMDEYRRELSKLFEWLMAVLSCDLGLETENSLNESVGEERKELHIVINYYPPCPQPDLVVGVAPHSDMVALTILLHDQIPGLQIRKDGEWLDVQCVPGALVVNVGDQLEILSNGKYKSIEHRSVVQKDLARMSWAMLCSPAPDIVVSPRTELTDEEHPPLYQGVSFGEYRMKFSKRD*

Protein Length: 350

Fln nts: ATGGGGACGAGAG_-_ATGCTTGCAAGTAGCAAGGTAATGGCGGTGCTGGAGAAGCGGGCAATCAGCCGAGTACAGACATTGGCGGAGAGTGGAATCCAGACGGTTCCGGCGGAGTTCGTGCGGCAAGTGGACAAGGCACTCGTACGxxxxxxxxxCCTGCATGTTCCCATTATCGATTTGCAGGGTTTGAGCCTTCTGCCGCGACATCATGATCAGAATCACACAATCGCTGCCCAAATTTCAGATGCTGCAGAGAAGTGGGGTTTCTTCCTCATTATAAATCATGGCGTCGCGGACTCTCTTATCGCTCGAGTACAAGCAACCAGCAGGGCTTTCTTCCAACTTCCGATTGAAGAAAAGGAAGCCTACGCTAGCGAACCAAAAAATCCCATCGGATATGGCAGCAAACTTGGATACTCAGATGGAGAGGATAAATCGGACTGGCGAGACTTTTACTATAACGGTCTCTGGCCTCCTGCCACGAGAGAAATGACGAAGTGGCCCATACAAGTCTATGATTTCACAGAAGCTATGGATGAATACAGAAGAGAGTTGTCGAAGCTATTCGAGTGGCTGATGGCCGTATTGTCGTGCGATCTTGGTTTAGAGACTGAAAATTCTCTGAACGAGAGCGTGGGAGAGGAGAGGAAGGAGTTGCATATAGTAATAAATTACTACCCACCGTGTCCTCAACCGGATCTGGTTGTGGGAGTGGCACCCCATTCTGATATGGTCGCGCTTACCATTCTCCTCCACGACCAAATCCCGGGGCTTCAAATTCGCAAAGATGGGGAGTGGCTTGATGTCCAATGCGTTCCTGGCGCTCTAGTTGTCAACGTCGGTGATCAGTTGGAGATATTGAGCAATGGCAAATACAAGAGCATTGAGCACAGGAGCGTGGTGCAGAAAGACCTCGCCAGAATGTCATGGGCCATGCTTTGCAGCCCTGCGCCTGATATAGTGGTGTCACCCAGGACAGAATTGACAGACGAAGAGCATCCTCCACTGTACCAGGGCGTTTCTTTTGGAGAGTATCGGATGAAATTTTCAAAAAGGGATTAG___ATGGAAAGGGCCATGTTCATGGACTGAAGGTGCAGGCCGATTGTaACAGCAAGCAAGGAAGCATTTAATTAACTGGAATGTGCTGAGGAACATTCCTGTAGCGTGTCTTGTATTTAGGGTTTTTTAGGCTTTGGTTTTTGcACGGTGCCCTCTGTAATTCAGGTCAATtTTCCCACAATCTTTTATTCGTGTTGTATCTTTTCTTTTAAGGAAGGTTCCTATGGGACAAGCATGGACTGAGGGGTTATGTTTCGTGATGGCTGTAACATTTATCTATATATT

Fln Alignment:

sp_v1.1_unigene14293___AISRVQTLAESGIQTVPAEFVRQVDKALVRxxxLHVPIIDLQGLSLLPRHH---DQNHTIAAQISDAAEKWGFFLIINHGVADSLIARVQATSRAFFQLPIEEKEAYASEPKNPIGYGSKLGYS-DGEDKSDWRDFYYNGLWPPATREMTKWPIQVYDFTEAMDEYRRELSKLFEWLMAVLSCDLGLETENSLNESVGEERKELHIVINYYPPCPQPDLVVGVAPHSDMVALTILLHDQIPGLQIRKDGEWLDVQCVPGALVVNVGDQLEILSNGKYKSIEHRSVVQKDLARMSWAMLCSPAPDIVVSPRTELTDEEHPPLYQGVSFGEYRMKFSKR
A9NLF0_______________AITRVQTLAESGIQTVPSEYVRQVEKALVQxxxLLVPVIDLQRFSLLPSDHLRKDQYDTISTQISSAAENWGFFQIMNHGIPDSLIARVQAAGKAFFQLPIEEKEAYANEAQNPVGYGSKIGYSLDGEVKLEWGDYYYNIMWPPARRDMSKWPKQLSDFTEAMDEYSKELSKLFECLMEVLSRDLGLESENSLNESVGGEGKELRIRINYYPPCPQPDLVVGVAAHSDPGAITILLPDQIPGLQIRKDGAWIDVQFVPGALVVNIGDQFEILSNGKYSSIEHRSVVHKDLSRMSWAVFCAPPLDMVISPRRELIDDHHPPLYQQASFGEYLTKFFKK

SNPs (tot: 3)

Position	A %	C %	G %	T %	Probability
1011	20		80		0.995493
1200		66		33	0.997452
1228			66	33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain