SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene14284

Length: 2176 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

>sp_v1.1_unigene14284
AGATAAGTATGTTTTCAGAGAAAAAGTTGTTCCATGGGAGAGAGAAATTACAACAGATCCTAGCACACCAAAACGAAACCCTAAACCATTTTGTTTTGAGGATGAGCCAGCAAGTGAACATAATTTTCAAATGGAGGATGGTGTGGTACATGTTTATCCAAATAAAGAATCAAGCGAAGAACTTTTTCCTGTTGCTGATGCAACAACATTCTTCACTGATGTACATCGGATACTTAGAATCATTTCATTGGGAAATGTTCGTACTTTGTGCCATCATCGACTGCGCCTTTTAGAACAGAAGTTTAGCCTTCATTTAATGCTAAATGCAGACAGAGAATTCATGGCTCAGAAGAGTGCACCCCATCGTGATTTTTACAATGTTAGAAAAGTTGATACCCATGTACATCACTCGGCATGCATGAACCAGAAACATCTGCTGCGTTTTATCAAATCTAAGCTGAAGAAAGAACCGGATGAGGTGGTTATATTCCGGGATGGCAAATATCTCACCTTAAAGGAAGTTTTTGAGAGTTTGGACTTGACAGGGTATGACCTCAATGTTGATCTCCTGGATGTACATGCAGACAAGAATACGTTTCACCGATTTGATAAGTTTAATCTGAAGTATAACCCCTGTGGACAAAGTAGACTCAGAGAAATTTTCCTAAAGCAAGACAATCTCATTCAAGGTCGTTTTCTTGCTGAGCTGACAAAACAAGTATTGTCTGATCTGGAGGCAAGTAAATACCAGATGGCAGAGTATAGAATATCTGTTTATGGAAGGAAACAAAGCGAATGGGACCAGTTGGCAAGTTGGTTTGTTAACAATGAGATATACAGTGAAAATGCTATCTGGTTAATTCAGTTTCCTCGACTGTACAATGTGTACAAGGGAATGGGAATTGTTCGATCTTTTCAAAATATTTTGGATAACATTTTCATTCCTCTTTTTGAGGTTACAGTTGATCCAAGTTCTCATCCTCAACTACACGTCTTCTTGAAACAGGTGGTTGGCTTTGATATGGTGGATGATGAAAGTAAACCTGAAAGGCGTCCCACAAAGCACATGCCAACCCCAGCTCAGTGGACAAATGATTTCAATCCTGCTTTTTCATATTATGCTTACTATTGCTATGCAAATTTGTACACACTCAACAAGCTTCGTGAATCTAAAGGAATGACAACAATTAAATTTCGTCCTCACTGTGGCGAGGCTGGTGATATTGATCACTTGGCAGCTGCGTTCCTGTTGACTCACAATATTGCACATGGAAATAATCTTAGGAAGTCTCCTGCTTTGCAATATTTATTTTATCTTTCCCAGATTGGCTTGGCCATGTCCCCTTTGAGCAACAATTCATTATTTCTGGATTATCACCGAAATCCTTTTCCCATGTTTTTTGCACGTGGCCTCAATGTTTCCCTTTCAACAGACGATCCATTACAAATTCATTTGACAAAAGAACCTCTTGTGGAGGAATACAGTGTTGCTGCTCAGGTTTGGAAGCTCAGTGCTTGTGATCTTTGTGAAATTGCTCGTAATTCTGTCTACCAGTCTGGTTTCTCTCATGCGTGTAAGTTTCATTGGGTTGGAAGAAAGTATTACATCAGAGGTCCTGAAGGGAATGATATACATAAGACAAATGTACCTCATATGCGAGTTGAATTTCGCCATGAGGTCTGGAAAGAAGAGAGGCAATATTTATACCTTGGACAGGCCAAAATCCCTAGAGAAATTGATTTATAGAAACAAGCGTGGTTCTTTCATGTTACAATTAGAGCAAATATATCTCGTTGCTATATAGTTGACTGGAAGATATATATAAATTAGAAGTATTTGTTGAGAAGACTATATATTGATGTTGCAATACTGTAATGGAATGCTAGAATTCAAATGCAAAGCTTCCTGGACTTGTTGCTGGTGTACACAAAGTATATGCAGATATGTTAACCCCATGGTCAATTAATGTGGTGGTTGCGTTGCTTCAAAAATAATAAAGTGGTGAAAATTTCACCTTTTCATTGTCTTTTAATTAACTGGAGTAGTTTATATACTGCTACTCTGTGTAGGTCACTTGTAACTTTATATTAATTCCGTTTTGTTTCCCACATTTGCAGTTTGGGTGAACAAAGAGCATTTGAAATTGGCGGTCCTAAAATGTTTTTCAATATTGAA

Ace file of the UniGene sp_v1.1_unigene14284 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	AMP deaminase (EC:3.5.4.6); K01490 AMP deaminase [EC:3.5.4.6]	-	-	82%
FL-Next	sp=Probable AMP deaminase; Oryza sativa subsp. japonica (Rice).	-	-	81%
Blast2go	protein	-	-	90%

Source	ECs	Term	Type	e value	Identity
Blast2go	AMP deaminase.	EC:3.5.4.6	-	0.0	90%

Source	KEGGs	Term	Identity
Blast2go	Purine metabolism	00230	90%
Blast2go	Biosynthesis of plant hormones	01070	90%
Blast2go	Metabolic pathways	01100	90%
Blast2go	Biosynthesis of secondary metabolites	01110	90%

Source	ECs	Term	Type	e value	Identity
AutoFact	AMP deaminase.	EC:3.5.4.6	-	0.0	82%

Source	KEGGs	Term	Identity
AutoFact	Purine metabolism	00230	82%
AutoFact	Biosynthesis of plant hormones	01070	82%
AutoFact	Metabolic pathways	01100	82%
AutoFact	Biosynthesis of secondary metabolites	01110	82%

Source	GOs	Term	Type	Identity
Blast2go	embryo development ending in seed dormancy	GO:0009793	Biological Process	90%
Blast2go	purine ribonucleoside monophosphate biosynthetic process	GO:0009168	Biological Process	90%
Blast2go	AMP deaminase activity	GO:0003876	Molecular Function	90%
Blast2go	protein binding	GO:0005515	Molecular Function	90%
Blast2go	cytosol	GO:0005829	Cellular Component	90%
Blast2go	microsome	GO:0005792	Cellular Component	90%
Blast2go	nucleus	GO:0005634	Cellular Component	90%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: sp_plants

Fln subject: Q84NP7

Fln msg: your sequence is shorter than subject: 582 - 815

Fln protein: DKYVFREKVVPWEREITTDPSTPKRNPKPFCFEDEPASEHNFQMEDGVVHVYPNKESSEELFPVADATTFFTDVHRILRIISLGNVRTLCHHRLRLLEQKFSLHLMLNADREFMAQKSAPHRDFYNVRKVDTHVHHSACMNQKHLLRFIKSKLKKEPDEVVIFRDGKYLTLKEVFESLDLTGYDLNVDLLDVHADKNTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAELTKQVLSDLEASKYQMAEYRISVYGRKQSEWDQLASWFVNNEIYSENAIWLIQFPRLYNVYKGMGIVRSFQNILDNIFIPLFEVTVDPSSHPQLHVFLKQVVGFDMVDDESKPERRPTKHMPTPAQWTNDFNPAFSYYAYYCYANLYTLNKLRESKGMTTIKFRPHCGEAGDIDHLAAAFLLTHNIAHGNNLRKSPALQYLFYLSQIGLAMSPLSNNSLFLDYHRNPFPMFFARGLNVSLSTDDPLQIHLTKEPLVEEYSVAAQVWKLSACDLCEIARNSVYQSGFSHACKFHWVGRKYYIRGPEGNDIHKTNVPHMRVEFRHEVWKEERQYLYLGQAKIPREIDL*

Protein Length: 583

Fln nts: AGATAAGTATGTTTTCAGAGAAAAAGTTGTTCCATGGGAGAGAGAAATTACAACAGATCCTAGCACACCAAAACGAAACCCTAAACCATTTTGTTTTGAGGATGAGCCAGCAAGTGAACATAATTTTCAAATGGAGGATGGTGTGGTACATGTTTATCCAAATAAAGAATCAAGCGAAGAACTTTTTCCTGTTGCTGATGCAACAACATTCTTCACTGATGTACATCGGATACTTAGAATCATTTCATTGGGAAATGTTCGTACTTTGTGCCATCATCGACTGCGCCTTTTAGAACAGAAGTTTAGCCTTCATTTAATGCTAAATGCAGACAGAGAATTCATGGCTCAGAAGAGTGCACCCCATCGTGATTTTTACAATGTTAGAAAAGTTGATACCCATGTACATCACTCGGCATGCATGAACCAGAAACATCTGCTGCGTTTTATCAAATCTAAGCTGAAGAAAGAACCGGATGAGGTGGTTATATTCCGGGATGGCAAATATCTCACCTTAAAGGAAGTTTTTGAGAGTTTGGACTTGACAGGGTATGACCTCAATGTTGATCTCCTGGATGTACATGCAGACAAGAATACGTTTCACCGATTTGATAAGTTTAATCTGAAGTATAACCCCTGTGGACAAAGTAGACTCAGAGAAATTTTCCTAAAGCAAGACAATCTCATTCAAGGTCGTTTTCTTGCTGAGCTGACAAAACAAGTATTGTCTGATCTGGAGGCAAGTAAATACCAGATGGCAGAGTATAGAATATCTGTTTATGGAAGGAAACAAAGCGAATGGGACCAGTTGGCAAGTTGGTTTGTTAACAATGAGATATACAGTGAAAATGCTATCTGGTTAATTCAGTTTCCTCGACTGTACAATGTGTACAAGGGAATGGGAATTGTTCGATCTTTTCAAAATATTTTGGATAACATTTTCATTCCTCTTTTTGAGGTTACAGTTGATCCAAGTTCTCATCCTCAACTACACGTCTTCTTGAAACAGGTGGTTGGCTTTGATATGGTGGATGATGAAAGTAAACCTGAAAGGCGTCCCACAAAGCACATGCCAACCCCAGCTCAGTGGACAAATGATTTCAATCCTGCTTTTTCATATTATGCTTACTATTGCTATGCAAATTTGTACACACTCAACAAGCTTCGTGAATCTAAAGGAATGACAACAATTAAATTTCGTCCTCACTGTGGCGAGGCTGGTGATATTGATCACTTGGCAGCTGCGTTCCTGTTGACTCACAATATTGCACATGGAAATAATCTTAGGAAGTCTCCTGCTTTGCAATATTTATTTTATCTTTCCCAGATTGGCTTGGCCATGTCCCCTTTGAGCAACAATTCATTATTTCTGGATTATCACCGAAATCCTTTTCCCATGTTTTTTGCACGTGGCCTCAATGTTTCCCTTTCAACAGACGATCCATTACAAATTCATTTGACAAAAGAACCTCTTGTGGAGGAATACAGTGTTGCTGCTCAGGTTTGGAAGCTCAGTGCTTGTGATCTTTGTGAAATTGCTCGTAATTCTGTCTACCAGTCTGGTTTCTCTCATGCGTGTAAGTTTCATTGGGTTGGAAGAAAGTATTACATCAGAGGTCCTGAAGGGAATGATATACATAAGACAAATGTACCTCATATGCGAGTTGAATTTCGCCATGAGGTCTGGAAAGAAGAGAGGCAATATTTATACCTTGGACAGGCCAAAATCCCTAGAGAAATTGATTTATAG___AAACAAGCGTGGTTCTTTCATGTTACAATTAGAGCAAATATATCTCGTTGCTATATAGTTGACTGGAAGATATATATAAATTAGAAGTATTTGTTGAGAAGACTATATATTGATGTTGCAATACTGTAATGGAATGCTAGAATTCAAATGCAAAGCTTCCTGGACTTGTTGCTGGTGTACACAAAGTATATGCAGATATGTTAACCCCATGGTCAATTAATGTGGTGGTTGCGTTGCTTCAAAAATAATAAAGTGGTGAAAATTTCACCTTTTCATTGTCTTTTAATTAACTGGAGTAGTTTATATACTGCTACTCTGTGTAGGTCACTTGTAACTTTATATTAATTCCGTTTTGTTTCCCACATTTGCAGTTTGGGTGAACAAAGAGCATTTGAAATTGGCGGTCCTAAAATGTTTTTCAATATTGAA

Fln Alignment:

sp_v1.1_unigene14284___DKYVFREKVVPWEREITTDPSTPKRNPKPFCFEDEPASEHNFQMEDGVVHVYPNKESSEELFPVADATTFFTDVHRILRIISLGNVRTLCHHRLRLLEQKFSLHLMLNADREFMAQKSAPHRDFYNVRKVDTHVHHSACMNQKHLLRFIKSKLKKEPDEVVIFRDGKYLTLKEVFESLDLTGYDLNVDLLDVHADKNTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAELTKQVLSDLEASKYQMAEYRISVYGRKQSEWDQLASWFVNNEIYSENAIWLIQFPRLYNVYKGMGIVRSFQNILDNIFIPLFEVTVDPSSHPQLHVFLKQVVGFDMVDDESKPERRPTKHMPTPAQWTNDFNPAFSXXXXXXXXXXXXXNKLRESKGMTTIKFRPHCGEAGDIDHLAAAFLLTHNIAHGNNLRKSPALQYLFYLSQIGLAMSPLSNNSLFLDYHRNPFPMFFARGLNVSLSTDDPLQIHLTKEPLVEEYSVAAQVWKLSACDLCEIARNSVYQSGFSHACKFHWVGRKYYIRGPEGNDIHKTNVPHMRVEFRHEVWKEERQYLYLGQAKIPREID
Q84NP7_______________EKYMFREEVAPWEKEIITDPSTPKPNPNPFYYEQQTKTEHHFEMVDGVIHVYPNKDAKERIYPVADATTFFTDMHYILRVLAAGDIRTVCYKRLNLLEQKFNLHLMVNADRELLAQKAAPHRDFYNVRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGTYLTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAELTKEVFSDLEASKYQMAEYRISIYGRKKSEWDQMASWIVNNELYSENVVWLIQIPRIYNVYREMGTINSFQNLLDNIFLPLFEVTVDPASHPQLHVFLQQVVGLDLVDDESKPERRPTKHMPTPEQWTNVFNPAYAYYVYYCYANLYTLNKLRESKGMTTIKLRPHCGEAGDIDHLAAAFLTSHNIAHGVNLKKSPVLQYLYYLAQIGLAMSPLSNNSLFIDYHRNPFPTFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASLWKLSSCDLCEIARNSVYQSGFSHRLKSHWIGRNYYKRGHDGNDIHQTNVPHIRIEFRHTIWKEEMELIHLRNVDIPEEID

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain