SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene14174

Length: 831 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene14174

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	0.0	38%
Blast2go	protein	-	-	9.87281e-29	52%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A9T509

Fln msg: Distance to subject end: 494 aas, your sequence is shorter than subject: 276 - 1041

Fln protein: FQFRIPHLLITFSRYSCMESSFVFKAKTALHTAAAKAERVLTEIKADFKHDFGLNGSASANSESEKKAESSSVGNTEYEDKSQNPNLVAPKGPKFLLDKQIEETTVNGSSVRQYSDDISKDESTNHVPKKMREQEFWRRCFATVKQGKHNILEKDKKQDISIVPLTLDEGSCMNAAVPNLEMESPKKDPAEEEAYAKAFTMVSIPPSLIVRQLASAVEVGRSFKLMKELAVLNRDPLQGNDWPGFVPSFSAMKVLSLRDKDGKLRTQLDIDGGNHS

Protein Length: 277

Fln nts: GTTTCAATTTCGAATTCCACATCTTCTCATCACATTTTCTCGATACTCATGTATGGAGTCTTCGTTCGTTTTCAAAGCCAAAACAGCACTTCATACAGCAGCCGCTAAGGCAGAGCGGGTGCTGACGGAAATTAAGGCAGATTTTAAGCACGATTTTGGGCTGAACGGTTCTGCTTCTGCAAATTCAGAGAGCGAAAAAAAAGCAGAGTCGTCTTCAGTAGGTAATACAGAATATGAAGACAAGTCTCAGAATCCCAACCTTGTGGCCCCAAAGGGACCAAAATTCTTATTGGATAAACAAATTGAAGAAACAACAGTCAATGGATCTTCTGTAAGACAGTATTCAGATGACATTTCCAAGGATGAGAGTACAAATCATGTACCCAAGAAAATGAGGGAGCAGGAGTTTTGGAGACGTTGCTTTGCAACAGTAAAACAAGGGAAGCACAACATCTTGGAGAAGGATAAGAAACAAGATATATCTATTGTACCACTAACTCTAGATGAAGGATCCTGCATGAATGCAGCAGTGCCAAATTTAGAGATGGAGAGCCCAAAGAAGGATCCTGCAGAAGAAGAGGCCTATGCAAAAGCCTTCACCATGGTTTCAATCCCCCCTTCATTAATTGTTAGACAGTTAGCCTCGGCTGTTGAGGTAGGACGGAGCTTTAAATTGATGAAGGAGTTAGCAGTGCTAAACAGGGATCCCTTGCAAGGAAATGATTGGCCTGGTTTTGTGCCTAGTTTTTCTGCAATGAAGGTTCTATCCCTTCGAGACAAGGATGGAAAGTTGAGGACACAACTTGACATTGATGGAGGGAATCATTCCTT

Fln Alignment:

sp_v1.1_unigene14174___ERVLTEIKADFKHDFG----LNGXXXXXXXXXXXXXXXXVGNTE----YEDK-----------SQNPNLVAPKGPKFLLDKQIEETTVNGSSVRQYS------DDISKDESTNHVPKKMREQEFWRRCFATVKQGKHNILEKDKKQDISIVPLTLDEGSCMNAAVPNLEMESPKKDPAEEEAYAKAFTMVSIPPSLIVRQLASAVEVGRSFKLMKELA-----VLNRDPLQGN-DWPGFVPSFSAMKVLS-LRDKDGKLR
A9T509_______________ERVLTEIKADIKADFGRPLTLDGITRHSGKHKHDAEFPWSAKTDSERRYEDEFKRRILDLSKASMSWNMPSNKPEDFLERPDNEHESVDMRTAMTLVGNVLEVDKVLKDLWFQYVPKKMKEQEFWRRYFIAVKRIRQDVINSDSDNSVGRSWSNIER----RLTFVGIGNESLRKDPLEEEAYKEAFSVITVPPSVIVRRLAATIEVGRAVKSMQELASQGGGLLDRDLLSNNGDWSGIVASFAVMKRLSGGRDKDNKLR

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
462	85			14	0.993533
465	85		14		0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain