SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene13854

Length: 1022 nt

Origin of reads: Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene13854

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Copper-transporting atpase p-type, putative n=1 Tax=Ricinus communis RepID=B9RC99_RICCO	-	-	55%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	36%
Blast2go	heavy metal p-type atpase	-	-	71%

Source	ECs	Term	Type	e value	Identity
Blast2go	Copper-exporting ATPase.	EC:3.6.3.4	-	0.0	71%

Source	GOs	Term	Type	Identity
Blast2go	auxin biosynthetic process	GO:0009851	Biological Process	71%
Blast2go	copper ion transport	GO:0006825	Biological Process	71%
Blast2go	ATP biosynthetic process	GO:0006754	Biological Process	71%
Blast2go	detoxification of copper ion	GO:0010273	Biological Process	71%
Blast2go	copper-exporting ATPase activity	GO:0004008	Molecular Function	71%
Blast2go	metal ion binding	GO:0046872	Molecular Function	71%
Blast2go	ATP binding	GO:0005524	Molecular Function	71%
Blast2go	integral to membrane	GO:0016021	Cellular Component	71%
Blast2go	plastid	GO:0009536	Cellular Component	71%

Source	InterPros	Term	Type	Identity
Blast2go	Heavy metal-associated domain, HMA	IPR006121	-	71%
Blast2go	ATPase, P type, cation/copper-transporter	IPR006403	-	71%
Blast2go	Heavy-metal-associated, conserved site	IPR017969	-	71%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LQ20

Fln msg: Separated hits, possible frame ERROR between 508 and 729, Distance to subject end: 569 aas, your sequence is shorter than subject: 341 - 998

Fln protein: FHPASLNDGEIGNAIADAGFAATLQDDDINERSTKICRLRITGMTCTACSSSVETALEKLAGVQKCSVALTTEEAEIHYDVKQISCAQLIDAVEEMGFLAELINTGEDRDKVNLNLQGVHSTEAVKTVELSLQALPGVKSVEISPNGDKVAVWYDPDLTGPRCFIETIxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGALLRWILCTPVQFIIGWQFYVGAYKSLRHGSANMDVLVALGTNAAYFYSFYSLVRAATSKTFKGTDFFETSAMLISFILLGKLLKVLAKGKTSEAIA

Protein Length: 342

Fln nts: CTTTCATCCCGCATCATTGAATGATGGGGAAATCGGAAACGCCATAGCAGATGCAGGCTTTGCAGCCACATTGCAGGATGATGACATCAATGAGAGGTCTACAAAGATCTGTCGTCTTCGCATTACAGGAATGACTTGCACAGCTTGTTCTTCGTCAGTAGAAACGGCACTGGAAAAGTTGGCAGGAGTCCAGAAATGCTCTGTGGCATTAACAACAGAAGAAGCGGAAATACATTATGACGTTAAACAGATTAGCTGCGCACAGTTAATAGACGCAGTTGAAGAGATGGGTTTCTTAGCTGAATTGATAAACACAGGGGAGGACAGGGACAAAGTGAACTTAAACCTTCAGGGAGTCCATTCTACTGAAGCGGTAAAGACCGTTGAGCTTTCTTTGCAAGCATTACCTGGGGTAAAGTCGGTGGAAATCAGCCCAAATGGAGATAAGGTTGCAGTATGGTATGACCCTGACCTTACAGGACCAAGATGTTTTATAGAAACAATTGAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGGGGCGCTGTTGAGATGGATTTTGTGTACACCTGTACAATTCATAATTGGATGGCAATTTTACGTTGGTGCTTATAAATCCCTGAGACATGGATCGGCTAATATGGATGTTTTGGTAGCCCTAGGGACAAATGCAGCTTATTTTTATTCATTTTATTCGCTGGTTAGAGCTGCAACTTCAAAGACCTTTAAAGGTACAGACTTCTTTGAGACAAGTGCGATGCTAATCTCCTTCATTCTTCTAGGaAAGTTGCTGAAAGTTTTAGCCAAAGGCAAGACTTCAGAAGCCATTGCA

Fln Alignment:

sp_v1.1_unigene13854___FHPASLNDGEIGNAIADAGFAATLQDDDINERS----TKICRLRITGMTCTACSSSVETALEKLAGVQKCSVALTTEEAEIHYDVKQISCAQLIDAVEEMGFLAELINTGEDRDKVNLNLQGVHSTEAVKTVELSLQALPGVKSVEISPNGDKVAVWYDPDLTGPRCFIETIDxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGALLRWILCTPVQFIIGWQFYVGAYKSLRHGSANMDVLVALGTNAAYFYSFYSLVRAATSKTFKGTDFFETSAMLISFIXXXXXXXXXXXXXTSEAI
B8LQ20_______________YDPSKVKEEDIKEAIEDAGFDAEVLPK-ISSRSKDQGTVTGKFRIGGMTCAACVNSVEGILRNLPGVTRAVVALATSMGEVEYDPNQMGKVEIINAIEDAGFDAELIQSGQ-QDILSIMIEGLFSEEDAKFVEDMLHNMKGVRDFVVDPLLAKYDILFDPEVIGLRSIIDAIExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGDWLKWALVSPVQFIIGKRFYVAAYRALRNGSANMDVLIALGTSAAYFYSVCALIYGAVFH-YRLATYFETSAMLITFVLLGKYLEVVAKGKTSNAI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain