SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene13753

Length: 1125 nt

Origin of reads: Biogeco_2 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene13753

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Cytochrome P450 n=1 Tax=Populus trichocarpa RepID=B9HDE6_POPTR	-	-	55%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	87%
Blast2go	cytochrome p450	-	-	77%

Source	GOs	Term	Type	Identity
Blast2go	electron transport chain	GO:0022900	Biological Process	77%
Blast2go	electron carrier activity	GO:0009055	Molecular Function	77%
Blast2go	monooxygenase activity	GO:0004497	Molecular Function	77%
Blast2go	heme binding	GO:0020037	Molecular Function	77%
Blast2go	mitochondrion	GO:0005739	Cellular Component	77%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Cytochrome P450	IPR001128	-	0.0	77%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LKI7

Fln msg: ERROR#3, very serious frame error, Overlapping hits, possible frame ERROR between 98 and 89, and overlapping frame ERROR between 737 and 713, Distance to subject end: 67 aas, your sequence is shorter than subject: 375 - 530

Fln protein: KPMVKKMAACTSSMLENWQEMMSQVDSNxxxxxVHSEFRTLTADIIAHTAFSSSYNEGKEVFELQRDYKRWLLKLYYLSTSQEASNCNIVVFHL*SFACDCKFISTCTSVYVF*IVHWGLLFYGLMP*SIA*RFIERYR*FIVFLKRNNVSITYN*RLGTYIS*PLQIYSYQKEQVCLED*QKNQRNPEFYNSG*AGVQNNIKNSGWLRK*PAWNHDDCQPEGIGWVPKRSKHDY*xxxxxxxxxxLCRPRDNFQSADLGSILALDKPGMAGNIKERSY*CLWYRYTRCGHA*QDEIDDYGAK*NSKVISTSC*VNKKSIQSNQAWPVLSSERCSLVNFNFGNASQ*KVLGSRCKLV*AREICSGCFKGSSSSKC

Protein Length: 376

Fln nts: TTAAGCCAATGGTGAAGAAAATGGCTGCTTGCACTTCATCCATGCTCGAGAATTGGCAAGAGATGATGTCTCAAGTAGACTCTAATxxxxxxxxxxxxxxxGTTCACAGCGAGTTTAGAACATTAACAGCAGACATCATAGCCCATACTGCATTCAGTAGCAGTTACAATGAAGGCAAAGAAGTATTTGAATTGCAAAGAGATTACAAGCGATGGTTGCTGAAGCTGTACTATCTGTCTACATCCCAGGAAGCCAGTAATTGCAATATAGTTGTCTTTCATTTATAGAGTTTTGCATGTGATTGCAAATTCATTAGTACTTGTACTTCTGTTTATGTTTTTTAAATAGTCCATTGGGGCCTGTTGTTCTATGGGCTAATGCCATAATCCATTGCATAAAGGTTTATTGAGCGCTATAGATAGTTCATAGTGTTTCTAAAAAGGAATAATGTTTCAATTACTTATAATTAAAGATTAGGGACTTATATTAGTTGACCTTTGCAGATCTATTCCTACCAGAAGGAACAGGTATGCCTGGAAGATTGACAGAAGAATCAAAGAAATCCTGAATTCTATAATTCAGGGTAGGCTGGAGTCCAGAACAACATCAAGAACTCAGGTTGGTTACGGAAGTGACCTGCTTGGAATCATGATGACTGCCAACCAGAAGGAATTGGGTGGGTCCCAAAGAGATCTAAGCATGACTATTGAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTTTGCAGGCCACGAGACAACTTCCAATCTGCTGACTTGGGCAGTATTCTTGCTCTCGATAAACCCGGAATGGCAGGAAATATTAAGGAAAGAAGTTATTAATGTCTGTGGTACAGATATACCAGATGCGGACATGCTTAGCAGGATGAAATCGATGACTATGGTGCTAAATGAAACTCTAAGGTTATATCCACCAGCTGCTAGGTTAATAAGAAAAGCATACAAAGCAATCAAGCTTGGCCAGTTCTCTCTTCCGAAAGATGCAGCCTTGTCAATTTCAATTTTGGCAATGCATCACAATGAAAAGTTTTGGGGTCCAGATGCAAACTTGTTTAAGCCAGAGAGATTTGCAGCGGGTGTTTCAAGGGCAGCAGTTCATCCAAATGC

Fln Alignment:

sp_v1.1_unigene13753___KPMVKKMAACTSSMLENWQEMMSQVDSNGxxxDVHSEFRTLTADIIAHTAFSSSYNEGKEVFELQRxxxxxxxxFFAGHETTSNLLTWAVFLLSINPEWQEILRKEVINVCGTDIPDADMLSRMKSMTMVLNETLRLYPPAARLIRKAYKAIKLGQFSLPKDAALSISILAMHHNEKFWGPDANLFKPERFAAGVSRAAVHPN
B8LKI7_______________KPMVKKMAACTSSMLENWQEMMAQADSHGxxxDVHHDFRALTADIISHTAFGSSYNEGKEVFELQRxxxxxxxxFFAGHDTTSNLLTWAVFLLSINPEWQEILRKEVISVCGTDIPDADMLSKMKSMTMVLNETLRLYPPASKIIRKAYKAIKLGQFSLPKGAVLSFSILAMHHNEKFWGLDANLFKPERFAAGVSKAAIHPN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain