SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene13734

Length: 441 nt

Origin of reads: Uma

UniGene Fasta

>sp_v1.1_unigene13734
GTCAGGAGCTGCCAAGGGAAAATGGAGAAATCATTCCTTAGTTTTAAGAGCAGCTACCCTAGTTGGGAGCCAAATGCCCAGGGAAAGCAGTTCCTATCTACTCTTTTGGATTTCCGGCAGCAAGAACAGGACAGGCAAACAATACAGATGTATTCACCTGATCGAATTTCACAAAGATTTCCAGCTTTAAGAGCTTCAGGTAGTGGCTATAGTTCAGGTTTGAGGGAAGGACTTCCGTACAGGTGGCCCTTGCCTAGATCATATTCTATTGAAGTTCAGCCTGGTCAATTGGACCCATCTAGAACTAGCGAGATGGAACAAAATGATCATTTGTACTGGCTTGATCGGTACTATACTTTCCAGTCACTTCATGGTTCATATGTGAGGTACAACGAATGCTGGTACATCTGGATTGCAACATGACTTGATTCCAAGCGAAGG

Ace file of the UniGene sp_v1.1_unigene13734

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	atg9; autophagy protein 9	-	-	3.0e-11	38%
FL-Next	tr=Putative uncharacterized protein; Ricinus communis (Castor bean).	-	-	0.0	48%
Blast2go	autophagy protein 9	-	-	3.3841e-17	54%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Autophagy-related protein 9	IPR007241	-	3.3841e-17	54%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9T2A0

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 152 aas, your sequence is shorter than subject: 141 - 864

Fln protein: VRSCQGKMEKSFLSFKSSYPSWEPNAQGKQFLSTLLDFRQQEQDRQTIQMYSPDRISQRFPALRASGSGYSSGLREGLPYRWPLPRSYSIEVQPGQLDPSRTSEMEQNDHLYWLDRYYTFQSLHGSYVRYNECWYIWIAT*

Protein Length: 142

Fln nts: GTCAGGAGCTGCCAAGGGAAAATGGAGAAATCATTCCTTAGTTTTAAGAGCAGCTACCCTAGTTGGGAGCCAAATGCCCAGGGAAAGCAGTTCCTATCTACTCTTTTGGATTTCCGGCAGCAAGAACAGGACAGGCAAACAATACAGATGTATTCACCTGATCGAATTTCACAAAGATTTCCAGCTTTAAGAGCTTCAGGTAGTGGCTATAGTTCAGGTTTGAGGGAAGGACTTCCGTACAGGTGGCCCTTGCCTAGATCATATTCTATTGAAGTTCAGCCTGGTCAATTGGACCCATCTAGAACTAGCGAGATGGAACAAAATGATCATTTGTACTGGCTTGATCGGTACTATACTTTCCAGTCACTTCATGGTTCATATGTGAGGTACAACGAATGCTGGTACATCTGGATTGCAACATGACTTGATTCCAAGCGAAGG

Fln Alignment:

sp_v1.1_unigene13734___RSCQGKMEKSFLSFKSSYPSWEPNAQGKQFLSTLLDFRQQE-QDRQTIQMYSPDRISQRFPALRASGSGYSSGLREGLPYRWPLPRSYSIEVQPG-QLDPSRTSEMEQNDHLYWLDRYYT
B9T2A0_______________RSSQGKMEKSFLSFQSSYPSWEPNIQGKQFLSTLRNFRAQKLQGHGVKHVYSPPRVWRGSPNLRGPGDRNTAFSRE-------MPHS-----TPGFHLGSLWLIDEDQRNHPYLLDWYYT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain