SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene13726

Length: 785 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene13726

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Transcription initiation factor TFIID subunit, putative; K03127 transcription initiation factor TFIID subunit D11	-	-	77%
FL-Next	tr=TBP-associated factor 13; Solanum melongena (Eggplant) (Aubergine).	-	-	88%
Blast2go	transcription factor tfiid	-	-	88%

Source	GOs	Term	Type	Identity
Blast2go	transcription initiation, DNA-dependent	GO:0006352	Biological Process	88%
Blast2go	transcription from RNA polymerase II promoter	GO:0006366	Biological Process	88%
Blast2go	DNA binding	GO:0003677	Molecular Function	88%
Blast2go	RNA polymerase II transcription factor activity	GO:0003702	Molecular Function	88%
Blast2go	translation initiation factor activity	GO:0003743	Molecular Function	88%
Blast2go	transcription factor complex	GO:0005667	Cellular Component	88%
Blast2go	plastid	GO:0009536	Cellular Component	88%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Transcription initiation factor IID, 18kDa subunit	IPR003195	-	0.0	88%
Blast2go	Histone-fold	IPR009072	-	0.0	88%

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
719		20	80		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain