SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene13643

Length: 762 nt

Origin of reads: Biogeco_2 Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene13643

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	single-strand binding protein	-	-	1.0e-20	55%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	88%
Blast2go	single-strand binding protein	-	-	5.31149e-34	70%

Source	GOs	Term	Type	e value	Identity
Blast2go	negative regulation of DNA recombination	GO:0045910	Biological Process	5.31149e-34	70%
Blast2go	mitochondrial genome maintenance	GO:0000002	Biological Process	5.31149e-34	70%
Blast2go	single-stranded DNA binding	GO:0003697	Molecular Function	5.31149e-34	70%
Blast2go	plastid	GO:0009536	Cellular Component	5.31149e-34	70%
Blast2go	mitochondrion	GO:0005739	Cellular Component	5.31149e-34	70%

Full-Lengther Next Prediction

SNPs (tot: 31)

Position	A %	C %	G %	T %	Probability
166			25	75	0.996473
167	75			25	0.996473
169	75		25		0.996473
170			75	25	0.996473
174	75	25			0.996473
175	75			25	0.996473
178	75		25		0.996473
181	75	25			0.996473
183	75		25		0.996473
184	75			25	0.996473
188		66		33	0.997452
269			16	83	0.994512
341		16		83	0.994512
342			16	83	0.994512
346	83		16		0.994512
347			83	16	0.994512
352	83	16			0.994512
355			16	83	0.994512
356			16	83	0.994512
366	83	16			0.994512
367	16		83		0.994512
433		16	83		0.999991
437	83	16			0.999991
440	83			16	0.999991
443		16		83	0.999991
444		16		83	0.999991
448			16	83	0.999991
453			83	16	0.999991
455	16			83	0.999991
456	83	16			0.999991
458	16		83		0.999991

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain