SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene13456

Length: 1089 nt

Origin of reads: Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene13456

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	receptor kinase, putative	-	-	35%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	27%
Blast2go	protein	-	-	57%

Source	GOs	Term	Type	Identity
Blast2go	binding	GO:0005488	Molecular Function	57%
Blast2go	protein kinase activity	GO:0004672	Molecular Function	57%
Blast2go	receptor activity	GO:0004872	Molecular Function	57%
Blast2go	hydrolase activity	GO:0016787	Molecular Function	57%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	57%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Leucine-rich repeat	IPR001611	-	0.0	57%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLA8

Fln msg: Distance to subject end: 197 aas, your sequence is shorter than subject: 362 - 914

Fln protein: PDLWTMSNLTDLNLAKNVFGGSLNFNWAIENRPTCSVLQTLNLSFNRLHTFYNTLDLSGFKNLTVVDLSHNQIIGSDILAELFNLERLTNISMSRNSLLSIPLFSKNSSRVKYLDLSNSNLSGTVSSLARISSLLYLDLSHNNLTGSFPIDAQKLQFLDISFNNFSGRANEEDVRKFGPAAFINSGLYNNPSKTPNSNNAHFKPPPPPTLPHYKVFHSLRKGAMVAIVSVAAVTVTAMAFFLFFFSRRLRARAKNKSAVPKPPFTWKTDRSISESGPFWFETDSGTWVADIKDSSSAPVIIFEKPLLNLTFSDLLALTSHFSKESQLAEGQNGPIYRAILPGEIHVAIKVLKQAKDLNAEEA

Protein Length: 363

Fln nts: GCCGGACCTATGGACTATGAGCAATCTGACAGACTTGAATTTGGCGAAGAATGTATTCGGCGGAAGCCTGAACTTTAATTGGGCCATCGAAAATCGTCCAACGTGCTCAGTTTTACAGACTCTGAATCTTTCTTTCAATCGATTGCATACATTCTACAACACGCTGGATCTCTCCGGCTTCAAAAATCTTACGGTGGTGGACTTATCCCACAACCAGATTATCGGTAGCGATATACTTGCTGAGCTGTTCAACTTGGAAAGACTCACTAATATTTCTATGTCTCGAAATAGTTTGCTTTCAATACCATTGTTTTCAAAGAATTCAAGCAGGGTTAAATATCTGGATCTTTCCAACAGCAATCTCAGCGGAACCGTTTCTTCTCTGGCTCGCATTAGTTCTCTACTCTATCTTGATCTCTCTCATAATAATCTAACCGGGTCATTCCCAATTGATGCTCAAAAATTGCAATTCCTCGACATTTCCTTCAATAACTTCTCTGGAAGAGCCAACGAAGAGGATGTCAGGAAATTTGGTCCCGCGGCCTTTATTAATTCTGGACTCTATAACAATCCATCCAAAACCCCCAATTCGAACAATGCCCATTTCAAGCCTCCGCCGCCTCCCACTCTTCCGCATTATAAGGTATTCCATTCTTTGAGGAAAGGAGCAATGGTAGCAATAGTATCAGTCGCTGCAGTAACAGTGACTGCAATGGCATTCTTCTTGTTTTTCTTCTCTAGAAGATTAAGAGCCCGAGCTAAGAATAAATCGGCGGTCCCAAAGCCTCCATTTACATGGAAAACTGACAGATCCATAAGCGAATCCGGGCCATTCTGGTTCGAGACAGATTCTGGTACATGGGTAGCTGACATCAAGGACTCATCTTCGGCTCCAGTAATCATTTTTGAAAAACCCCTGCTCAACCTCACGTTCTCTGATCTCCTAGCCTTAACTTCTCATTTCAGCAAAGAATCCCAGCTGGCTGAAGGACAAAACGGCCCCATTTACAGAGCAATATTACCGGGAGAAATCCATGTAGCAATCAAGGTATTAAAGCAGGCAAAGGATCTAAATGCAGAGGAAGCTGT

Fln Alignment:

sp_v1.1_unigene13456___DLWTMSNLTDLNLAKNVFGGSLNFNWAIENRPTCSVLQTLNLSFNRLHTFYNTLDLSGFKNLTVVDLSHNQIIGSDILAELFNLERLTNISMSRNSLL--------------SIPLFSKNSSRVKYLDLSNSNLSGTVSSLARISSLLYLDLSHNNLTGSFPI---DAQKLQFLDISFNNFSG
B8LLA8_______________DLGSLQKLEDLDLSYNALD-----NIIPPSLGNCSSLLSLSFSSNRLSGSIPH-QLGNLRNIRTLYISNNNISGL-LPSSIFNLPLFYYFYFNYNTLMYSSVDFRYNTLSGISGSISKANMSHVKYLDLTTNMFTSIPEGIKNLSKLTYLSFTDNYLIGTIPNFIGNLYSLQYLYLDSNNLTG

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
682	50			50	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain