SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene13322

Length: 620 nt

Origin of reads: Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene13322

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	82%
Blast2go	dc1 domain-containing protein	-	-	2.77114e-40	78%

Source	GOs	Term	Type	e value	Identity
Blast2go	cell redox homeostasis	GO:0045454	Biological Process	2.77114e-40	78%
Blast2go	regulation of pollen tube growth	GO:0080092	Biological Process	2.77114e-40	78%
Blast2go	pollen tube guidance	GO:0010183	Biological Process	2.77114e-40	78%
Blast2go	response to cadmium ion	GO:0046686	Biological Process	2.77114e-40	78%
Blast2go	oxidoreductase activity	GO:0016491	Molecular Function	2.77114e-40	78%
Blast2go	antioxidant activity	GO:0016209	Molecular Function	2.77114e-40	78%

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
208		25		75	0.996473

SSRs (tot: 1)

Start position	End position	Sequence	Length
57	75	ATA ATA ATA ATA ATA ATA A	19

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain