SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene13077

Length: 1173 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene13077

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RWL2_RICCO	-	-	44%
FL-Next	tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice).	-	-	52%
Blast2go	protein binding	-	-	62%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Ankyrin repeat domain-containing protein 13	IPR021832	-	0.0	62%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9FWY3

Fln msg: Distance to subject end: 33 aas, your sequence is shorter than subject: 391 - 533

Fln protein: KIYDMHHVMLSVKSRRVPGAMTDEELFAASAGDTYTADGERDENEDDYAGLLTEEEKRQLENALKMDHLEIGDDGMPEDEGLDVGHRHSCYGREEFFRREERHNLGLLSGAKHNGDVEAREVKEVKEEKKGWFSWGKRAAKQENGKVVPPRSSLSVDGKVSDLLGESATRVPRKAGRYSPDLGRRSVDARPTDYRVDEFRKGKETDGRKSISIETTRRRKLAGNDGSNESEYKKGLRPVLWLTTQFPLQTDELLPLLDILSNKVKAIRRLRELLTTKLPPGTFPVKVAIPVVPTVRVIVTFTKFEELQPSEEFSTPPSSPGNLQDMKVKEYDAARQSSNSWFQWIKGPYSRGSAVPLSQEGFLEEVQDPFVIPSDYTWTSMDAKKQRTKEK

Protein Length: 392

Fln nts: AAGATCTATGATATGCACCATGTGATGCTTAGCGTGAAGTCGAGGCGGGTTCCCGGGGCAATGACTGATGAGGAACTATTTGCAGCCTCTGCAGGGGATACCTATACTGCTGATGGAGAGAGAGATGAGAATGAGGATGATTATGCAGGGCTGTTGACAGAGGAGGAGAAGAGGCAGTTGGAGAATGCCTTGAAGATGGATCATTTGGAAATTGGGGATGATGGGATGCCGGAGGATGAGGGATTGGATGTTGGACACCGCCATAGCTGCTATGGGAGGGAGGAATTCTTTCGCAGGGAAGAGAGGCACAACCTGGGTTTGTTATCTGGTGCCAAACACAATGGGGATGTTGAGGCTAGAGAGGTTAAGGAGGTTAAGGAAGAGAAGAAGGGTTGGTTCAGCTGGGGTAAGCGTGCTGCGAAGCAAGAAAACGGAAAGGTAGTGCCACCCAGGAGTTCTTTGAGTGTAGATGGCAAAGTTAGTGATCTGCTCGGTGAATCTGCGACAAGGGTTCCAAGGAAGGCTGGAAGATACTCACCTGACCTTGGTAGAAGATCTGTTGATGCACGGCCTACTGATTACAGGGTAGATGAATTTAGGAAGGGAAAGGAGACGGATGGTAGGAAGTCAATAAGTATAGAAACAACTCGCAGGCGCAAGCTCGCAGGCAATGATGGTAGCAATGAAAGTGAGTATAAGAAAGGATTAAGGCCGGTCCTGTGGCTCACAACCCAGTTTCCTCTCCAGACCGATGAGCTATTGCCACTGCTAGACATTTTGTCAAACAAGGTTAAGGCCATTCGTCGCTTAAGAGAATTGCTTACCACGAAGCTTCCACCTGGTACATTTCCTGTCAAGGTTGCTATTCCAGTTGTTCCTACTGTTAGAGTGATTGTTACTTTTACTAAATTTGAAGAACTGCAACCATCTGAAGAGTTTTCTACCCCACCTTCGAGTCCTGGGAATTTGCAAGATATGAAGGTAAAAGAATATGATGCTGCACGGCAATCTTCGAACTCATGGTTTCAGTGGATCAAAGGTCCATATAGTCGTGGTTCTGCGGTGCCTCTGAGCCAAGAAGGTTTCCTAGAAGAAGTTCAGGATCCCTTTGTTATTCCGAGTGATTATACATGGACATCTATGGATGCTAAAAAACAACGGACAAAGGAAAAG

Fln Alignment:

sp_v1.1_unigene13077___KIYDMHHVMLSVKSRRVPGAMTDEELFAASAGDTYTADGERDENEDDYAGLLTEEEKRQLENALKMDHLEIGDDGMPEDEGLDVGHRHSCYGXXXXXXXXXXHNLGLLSGAKHNGDVEARXXXXXXXXXXGWFS-WGKRAAKQE---NGKVVPPRSSLSVDGKVSDLLGESATRVPRKAGRYSPDLGRRSVDARPTDYRVDEFRKGKETDGRK-SISIETTRRRKLAGNDGSNESEYKKGLRPVLWLTTQFPLQTDELLPLLDILSNKVKAIRRLRELLTTKLPPGTFXXXXXXXXXXXXXXXXXXXKFEELQXXXXXXXXXXXXGNLQDMKVKEYDAARQSSNSWFQWIKGPYSRGSAVPLSQEGFLEEVQDPFVIPSDYTWTSMDAKKQRTKE
B9FWY3_______________KVYDMHHVMVSVKSRRVPGAMTDEEFFSAC--------NENDTESEGFDDVLTEEEKKQLEAALKMDSPD-GAGGEGQSDTF-VGPRHSCVEPREREIPIEDLSISGNGDSKHD--------------KKGWFGHWGKRVQSSKLEGTKKMAPPRSSLCVDEKVSDILIESPSNVQTRPGRHSVDV-----------VRGDESRRGKERDYRRPAASSECGHRRK----EGSKESEYKKGLRPVLWLSPNFPLRTEELLPLLDILANKVKAIRRLRDLLTTKLPPGTFPVKVAIPVVPTIRVLVTFTKFEELQPLEEFTTPPSSPDN------SKSPVAQSSSSSWIQWIKAPYHQNFSTAPGPSSRVEDIQDPFVIPADYVWTTPEEKKKKTQE

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
493	14	85			0.993533
495		85	14		0.993533
766		88		11	0.923564
903	16			83	0.994512
905			16	83	0.994512
906			16	83	0.994512
907	83		16		0.994512
993	85		14		0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain