SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene12980

Length: 956 nt

Origin of reads: Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene12980

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2	-	-	46%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	25%
Blast2go	type i inositol- -trisphosphate 5-phosphatase cvp2	-	-	60%

Source	GOs	Term	Type	e value	Identity
Blast2go	inositol or phosphatidylinositol phosphatase activity	GO:0004437	Molecular Function	0.0	60%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Inositol polyphosphate-related phosphatase	IPR000300	-	0.0	60%
Blast2go	Endonuclease/exonuclease/phosphatase	IPR005135	-	0.0	60%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5ADM7

Fln msg: Separated hits, possible frame ERROR between 868 and 880, Distance to subject end: 135 aas, No stop codon before M and M found is too far from subject M, your sequence is shorter than subject: 254 - 462

Fln protein: MNLPHLRSVSFRRFSRSFRSYRENVKGRPMLKRLWSASDRFLLGRTIKRTDSSCSFKSVSSSEEEDSYRVGDLPLFSPTSRSSSLKISEQKKYCLVASKQMVGIFLTVWVRSELRYHVHNLKVSCVGRGLMGYLGNKGCVSVSMSLYQTTFCFICSHLASGQKDGDELRRNSDVLEILKNTYFPRLHSFSGEKSPETILQHDRVIWLGDMNYRIALSYGDTKKLxxxxxWEALLEKDQLRIEQRAGRAFKGWNE

Protein Length: 255

Fln nts: CTGCAAACGTGTTGGTACAGAGGATAGTAGTCCTGCAGCTAAATGGGTTGCCCTCATTCATGAAACACTCAATAATTCACCAGGGACATGCACGATCAGAAGTAACAGGAGAACTTTATCATCTCTTGGAGAAAAATCTAGAGATATAACTGATCAAATTAGTAGTGCGCATTCTGATTTTGAAAGTTCAAAAATGAATTTGCCTCATTTACGAAGTGTGTCTTTTAGGCGTTTTAGCAGGAGCTTCAGGTCATATCGTGAAAATGTCAAGGGCAGGCCAATGTTGAAACGGCTGTGGAGTGCCTCTGACCGCTTCTTGTTGGGTAGGACAATCAAAAGGACAGATTCATCTTGCAGTTTTAAGTCAGTTTCTTCATCTGAAGAGGAAGACAGTTATCGTGTGGGAGATTTACCTCTCTTCTCTCCAACATCGAGGAGCTCTTCATTAAAGATCTCAGAGCAGAAAAAATATTGTTTAGTTGCAAGTAAACAAATGGTGGGCATATTTCTTACTGTGTGGGTTCGGAGCGAATTGAGATATCATGTACACAATTTGAAGGTTTCTTGCGTCGGACGCGGGCTAATGGGTTACCTAGGCAACAAGGGTTGTGTTTCAGTTAGCATGTCTCTGTATCAGACAACCTTCTGTTTTATTTGTAGCCACTTGGCCTCTGGGCAGAAAGACGGCGACGAACTCAGAAGGAATTCTGATGTCCTGGAAATCCTCAAGAATACGTACTTTCCACGGCTTCACAGCTTTTCTGGAGAGAAATCACCTGAAACTATTCTGCAGCACGATAGAGTTATTTGGCTTGGGGATATGAATTATCGCATTGCTCTCAGTTATGGTGATACAAAGAAGCTCTTxxxxxxxxxxxxTTGGGAGGCACTACTGGAGAAAGATCAGCTTAGGATTGAGCAGAGAGCTGGGAGAGCCTTCAAAGGCTGGAATGAAGG

Fln Alignment:

sp_v1.1_unigene12980___SKQMVGIFLTVWVRSELRYHVHNLKVSCVGRGLMGYLGNKGCVSVSMSLYQTTFCFICSHLASGQKDGDEL-RRNSDVLEILKN-TYFPR------------------------------------LHSFSGEKSPETILQHDRVIWLGDMNYRI-ALSYGDTKKLLxxxxWEALLEKDQLRIEQRAGRAFKGWNE
D5ADM7_______________SRQLAGLLVAVWVRKDLCPYIGEVDVGAVACGLGRTIGNKGAVALKMRVFRRILCVINCHFAA---HADAVARRNADFEYVYRNLTFIPMTAGVNTVAAGVSSAVQRFKNLNVRRGADLEAEKDIPVAGVASEVLPE-LAEADMLIWFGDFNYRLDDISYDEARNYIxxxxFDTILRKDQLRGEMKAGHVFQGMRE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain