SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene12855

Length: 1179 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene12855

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	senescence-associated protein, putative	-	-	4.0e-20	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	75%
Blast2go	b12d-like protein	-	-	4.891e-31	76%

Source	GOs	Term	Type	e value	Identity
Blast2go	leaf senescence	GO:0010150	Biological Process	4.891e-31	76%
Blast2go	peroxisome	GO:0005777	Cellular Component	4.891e-31	76%

Full-Lengther Next Prediction

SNPs (tot: 30)

Position	A %	C %	G %	T %	Probability
424	75	25			0.996473
626	33	33	33		0.997753
629	50			50	1.0
630		60	40		1.0
634	40		60		1.0
635			60	40	1.0
636		60		40	1.0
639		60	40		1.0
640	60	40			1.0
642	40		60		1.0
643		60		40	1.0
644		60		40	1.0
646		40	60		1.0
657		83		16	0.994512
659	83		16		0.994512
664		16		83	0.994512
672		87		12	0.992554
692	90		10		0.90298
697		10		90	0.90298
700		90	10		0.90298
701		10		90	0.90298
970	13			86	1.0
1037		84	15		1.0
1090	12		87		0.999964
1139			14	85	0.993533
1140	83			16	0.994512
1148	20			80	0.995493
1149	20		80		0.995493
1151	20			80	0.995493
1152	20			80	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain