SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene12807

Length: 1939 nt

Origin of reads: Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene12807

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Purple acid phosphatase 22 n=2 Tax=Arabidopsis RepID=PPA22_ARATH	-	-	66%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	66%
Blast2go	purple acid phosphatase-like protein	-	-	75%

Source	ECs	Term	Type	e value	Identity
Blast2go	Acid phosphatase.	EC:3.1.3.2	-	0.0	75%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Aminobenzoate degradation	00627		0.0	75%
Blast2go	Riboflavin metabolism	00740		0.0	75%

Source	GOs	Term	Type	Identity
Blast2go	metal ion binding	GO:0046872	Molecular Function	75%
Blast2go	protein serine/threonine phosphatase activity	GO:0004722	Molecular Function	75%
Blast2go	acid phosphatase activity	GO:0003993	Molecular Function	75%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	75%

Source	InterPros	Term	Type	Identity
Blast2go	Metallophosphoesterase domain	IPR004843	-	75%
Blast2go	Purple acid phosphatase-like, N-terminal	IPR008963	-	75%
Blast2go	Purple acid phosphatase, N-terminal	IPR015914	-	75%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LRS5

Fln msg:

Fln protein: MAPVSYKTLPNMGIGIFMILSCLAIYSEAGHYVRPHPRPIISTPSTTETDMDPEQVHISLVGSNSMRVTWMTAEDVPSLVEYGKSPGNYTSSAFGEISSNYWYLFYKSGYIHNVVIGPLEANTTYYYRCGGHGPDFKLKTPPSELPIVFSVAGDLGQTEWTKSTLQHINESYHDVFLLPGDLSYADNTQTLWDSFGRLVEPLASSRPWMVTEGNHEVETIILLMEHAFKSYNARWQMPYKESGSTSNLYYSFEVAGVHVIMLGSYANYGKDSDQYKWLQGDLGKVDRVKTPWIFVLLHAPWYNTNAAHEGEGEKMRVAMEPLLYAAKVDLVFAGHVHAYERFTHVYNNTADPCGPIYITIGDGGNREGLALDFKEPQSELSLFREASFGHGELTVYNATHTHWIWHRNEDVELVVSDEVWLTSLSNSANSCQKLQESSTSYDDEL*

Protein Length: 447

Fln nts: AGAAAATATAGTGCAAAACCATTTCATGAGGAATAAGTCTTATATATCGCTTATATGATGGGCACAGGGAGCGTTGAAATCGCTTGAGATAGGTGGAAACGTGCGGGCAACTAACGCTTTGAATTTATTTTTCGAACCCATTATTTTAATGCCTGAGCTCTTATTTAAGAACAGTAGGAACAAATGATACACAATTCAATTTCAGTCTCATGTATTGCACTGTGTGATAGATAAAGGGATTGAAGCTTTC_-_ATGGCTCCGGTTTCATATAAAACCCTGCCAAATATGGGCATCGGTATTTTTATGATCTTGTCTTGTTTGGCAATTTATTCAGAGGCGGGGCACTATGTTCGGCCCCATCCTCGTCCTATCATATCTACTCCTTCCACAACAGAAACGGACATGGATCCTGAGCAGGTTCATATTTCTCTGGTAGGAAGTAATTCTATGAGGGTAACGTGGATGACAGCGGAGGATGTACCTTCGTTGGTTGAATATGGAAAATCTCCGGGAAACTACACTTCTTCTGCTTTTGGGGAGATTTCTTCTAATTATTGGTATTTGTTCTACAAATCTGGCTACATTCATAACGTTGTGATTGGGCCACTTGAAGCGAATACTACCTACTATTATAGATGTGGAGGACATGGTCCGGATTTCAAGCTCAAGACACCACCGTCAGAGTTACCCATTGTTTTTTCTGTCGCAGGTGATTTGGGACAAACTGAGTGGACGAAATCAACTCTGCAACACATTAATGAGAGTTATCATGATGTTTTCCTTCTGCCTGGTGATCTCTCCTATGCTGACAACACCCAGACTCTGTGGGATTCATTTGGGAGGTTGGTGGAACCTCTGGCCAGCAGCAGGCCCTGGATGGTCACAGAAGGAAACCATGAGGTTGAAACAATTATCCTCCTGATGGAACATGCCTTTAAATCCTACAATGCTAGGTGGCAAATGCCATATAAAGAAAGCGGTTCCACTTCAAACTTGTATTACTCTTTTGAAGTTGCAGGAGTGCACGTTATCATGCTTGGTTCCTACGCTAATTATGGGAAGGATTCAGACCAATACAAGTGGCTGCAGGGTGATCTTGGAAAGGTAGATAGAGTGAAAACGCCCTGGATTTTTGTTCTGTTACATGCTCCCTGGTATAATACAAATGCTGCTCATGAGGGTGAGGGAGAGAAGATGAGAGTAGCCATGGAGCCTTTGCTTTACGCTGCCAAAGTGGATCTAGTTTTTGCAGGACATGTGCACGCTTATGAACGTTTTACTCATGTGTACAATAACACAGCTGATCCTTGTGGACCAATTTACATTACCATTGGAGATGGAGGAAACCGTGAAGGGCTTGCTTTAGATTTCAAGGAGCCACAATCTGAATTGTCTCTGTTCCGTGAAGCGAGCTTTGGACATGGTGAACTTACAGTATACAATGCAACACATACACATTGGATTTGGCATCGTAATGAAGACGTTGAGTTAGTGGTATCTGATGAAGTTTGGTTAACCAGTCTCAGCAATTCAGCAAACTCGTGTCAGAAATTACAGGAAAGTTCCACATCATATGATGACGAGCTATAA___GGAACCCATAAGTAAACGGATGAAGTCTTTTTTTAGCATTGAAGGCTGGGATTTCATTACAGGAATTGACCTCCAGACGAGAGATAACTATTTGCTTCTGATGAATGTTAAAATAGATTAGATAATAAGATGTGAGAGACTCCGGTATGTTAGCAGGTTGCGTAGTGAACAGCTTCAGAATCAAGTGGAGTGGGATGTGGAGATGAGTGCAAAACTTGCCCTGTATTTGTTACGACAAGATCCAGATCCAAAATATGGAAGGGACTGATTTTTAAAACAAATAAAATGTGTTAGGGTTTACATTTCTTGTATTAGAATGCGCAAAATTGTAATTAAATGCCACGTTAAAAC

Fln Alignment:

sp_v1.1_unigene12807___FMILSCLAIYSEA-GHYVRPHPRPIISTPSTTETDMDPEQVHISLVGS-NSMRVTWMTAED-VPSLVEYGKSPGNYTSSAFGEISSNYWYLFYKSGYIHNVVIGPLEANTTYYYRCGGHGPDFKLKTPPSELPIVFSVAGDLGQTEWTKSTLQHINESYHDVFLLPGDLSYADNTQTLWDSFGRLVEPLASSRPWMVTEGNHEVETIILLMEHAFKSYNARWQMPYKESGSTSNLYYSFEVAGVHVIMLGSYANYGKDSDQYKWLQGDLGKVDRVKTPWIFVLLHAPWYNTNAAHEGEGEKMRVAMEPLLYAAKVDLVFAGHVHAYERFTHVYNNTADPCGPIYITIGDGGNREGLALDFKEPQSELSLFREASFGHGELTVYNATHTHWIWHRNEDVELVVSDEVWLTSLSNSANSC
B8LRS5_______________FRLLCILIVISYASGSYVRPLPRSTLSVPLDTKSSSDPQQVHVSLSGNDNYMRISWMTKDDAVSSIVEYGTSSGKYTSSAEGE-NTNYRYLLYKSANVHHVVIGPLETGTLYYYRCGGNGAEYSFKTPPAQLPIAFAVVGDLGQTGWTTSTLQHVQQMNYDVLLLPGDLSYADYRQPLWDSFGRLVEPLASSRPWMVTQGNHEIEKIPLLVSTPFKAYNARWKMPYQESGSPSNLYYSFEVAGAHILMLGSYAEFGTDSDQYKWLQGDLSRVNRRKTPWLIALIHAPWYNTNTAHQGEGDDMKDAMEELLHAAKVDIVFAGHVHAYERFTRVFKNQPNPCGSVHITIGDGGNREGLASRYEDPPSGLSEFREASFGHGEFVIYNATHAHWTWHQNDDDESVVSDEVWINSLASVSNSC

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
209		83		16	0.994512
421	25			75	0.996473

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain