SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene12802

Length: 1061 nt

Origin of reads: Biogeco_1 Biogeco_2 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene12802

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.11.25)	-	-	51%
FL-Next	tr=Somatic embryogenesis receptor-like kinase 1; Araucaria angustifolia.	-	-	37%
Blast2go	atp binding protein	-	-	65%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring phosphorous-containing groups, Protein-serine/threonine kinases.	EC:2.7.11.-	-	0.0	65%

Source	GOs	Term	Type	Identity
Blast2go	cellular metabolic process	GO:0044237	Biological Process	65%
Blast2go	signal transducer activity	GO:0004871	Molecular Function	65%
Blast2go	protein binding	GO:0005515	Molecular Function	65%
Blast2go	protein serine/threonine kinase activity	GO:0004674	Molecular Function	65%
Blast2go	nucleotide binding	GO:0000166	Molecular Function	65%
Blast2go	membrane	GO:0016020	Cellular Component	65%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: D1MEH6

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 298 aas, your sequence is shorter than subject: 289 - 630

Fln protein: MMQWLRPGNTRASFPQVFKRGTLCYCYCLVAAAFLIWTEHVTALTPDGISLLKLKAHLNDTKKFLSHWNESDANPCDWTGIVCDHVSRRVIAVNLPYMHLGGTISSSIGELKKLRRLALHDNNLHGFIPPEIANCTELRALYLRDNYLEGEIPAGLGKLSNLMILDLSSNSLKGPIPPSIGHLSRLKFLNLSTNFLAGEIPKIGVLQGFGNHSFVGNLDLCGQQLDTLCKKSLGFPAVIPDSDCDVDPASTKPSGRISNGILIGAMVTMGVTLVLSSVLLMVLFLVQE*

Protein Length: 290

Fln nts: GGTTTGTCGTCCTATTTAATATGCAATGATGCAGTGGTTGAGACCTGGAAACACCAGAGCAAGTTTCCCCCAAGTTTTCAAGCGAGGAACCCTCTGCTACTGCTACTGTTTGGTCGCAGCAGCGTTTCTTATTTGGACCGAGCACGTGACTGCTTTAACGCCAGATGGGATATCATTGCTCAAGTTAAAAGCACACCTAAACGACACCAAAAAGTTCTTAAGCCACTGGAATGAATCAGATGCTAATCCATGTGACTGGACGGGAATAGTTTGTGACCATGTTAGCAGACGAGTTATCGCTGTTAATTTGCCTTATATGCACCTTGGTGGCACAATATCCTCCAGCATTGGGGAACTGAAAAAGTTACGGAGACTGGCTCTTCACGACAACAACTTGCACGGTTTCATTCCACCAGAAATTGCTAACTGTACTGAGTTGCGAGCATTGTATCTCCGGGACAACTACCTGGAGGGTGAAATTCCCGCAGGCCTGGGAAAACTCTCCAATCTTATGATACTGGATCTTTCCAGCAATTCGTTGAAAGGTCCAATTCCTCCCTCTATTGGCCATCTGAGCAGATTGAAATTTCTGAACCTATCGACCAATTTTCTGGCCGGGGAAATCCCCAAAATCGGAGTTTTACAAGGTTTTGGGAATCACTCGTTCGTCGGTAACTTGGATTTATGCGGTCAACAATTGGACACACTTTGCAAGAAGTCATTGGGATTTCCCGCTGTAATACCAGACTCAGATTGTGATGTAGATCCAGCATCAACTAAGCCATCAGGGCGAATTTCAAATGGAATCCTTATTGGAGCAATGGTGACAATGGGCGTGACTCTAGTTTTGTCTTCTGTTCTTCTTATGGTACTGTTTTTGGTGCAAGAATGACAGGGTCAAGCAACCTTAACAAAAATGGAGCAGCAGCTCTTGCAGGAAACCGATGCTAAGCTGGTCATGTTCCATGGAGATCTGCCGTATACATCCCAGGATATAATAAAGAGAATTGAAACACTTGATGATACTGATATCATTGGGTCTGGAGGCTTTGGTACCGTGT

Fln Alignment:

sp_v1.1_unigene12802___DGISLLKLKAHLNDTKKFLSHWNESDANPCDWTGIVCDHVSRRVIAVNLPYMHLGGTISSSIGELKKLRRLALHDNNLHGFIPPEIANCTELRALYLRDNYLEGEIPAGLGKLSNLMILDLSSNSLKGPIPPSIGHLSRLKFLNLSTNFLAGEIPKIGVLQGFGNHSFVGNLDLCGQQLDTLCKKSLGF----PAVIPDSDCDVDPA---STKPSGRISNGILIGA
D1MEH6_______________EGDALHSLRQNLIDTNNVLQSWDPTLVNPCTWFHVTCNN-DNSVIRVDFGNAALSGALVPQLGQLKKLQYLEFYSNNISGTIPKELGNLTNLVSLDLYFNNFTGPIPDSLGQLSKLRFLRLNNNSLTGPIPKSLTTITALQVLDLSNNNLTGEVPANGSFSLFTPISFGGNQYLCGPVAQKPCPGSPPFSPPPPFVPPPPVAGSNGARVQSSSSTGAIAGGVAAGA

SNPs (tot: 5)

Position	C %	G %	T %	Probability
156	25		75	0.996473
235		85	14	0.993533
344	71		28	1.0
885		66	33	0.997452
886		33	66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain