SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene12757

Length: 543 nt

Origin of reads: Uma

UniGene Fasta

>sp_v1.1_unigene12757
GTAGGAATTTCGCAAGATAGTTCGAGGGCGCTGCGAGTTTGCGAACAACTTATTCAGGAAGGGCCAGAGCCATTTCCTGTCTCATATCCAGAGAAGAAATTCCTCCAGTGTCTCCACCGGGCAGGGGCCACGGACGGATCATGATAAATCATTAGACCAATACTCATCATCGACAGTACAAAACTCCGAGGTTCTGGCAGTGGCCACTTCTCTGTCGGAGGAGAATGAGATATTAAGGAGAAATAATTTATTGCTTTTAACGGAGATTGCCCGCCTCCAGAGTCTGCGCAGCAGGGATAATGAGTTCTTGAGTGGGCGCAGTACCTGCAATCCTCCCTTGATGGACATGAACAGATCAAAAATGGAGAACGCCAGTCCTAGTAGTTCCATAACAGATGTTGCAAAAGAGATTAGTATGAGCCCACCAAAACTGTTTGGAGTTCCTCTCTGTTAGGAAAGTCAGAAAGTATTATTTTATATATATGACTTCCATGAATTTTGAGGTCATGTATTGAGCTCTATAGTTTCCCATTTGCAATAAAT

Ace file of the UniGene sp_v1.1_unigene12757

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	HSF_DNA-bind domain containing protein	-	-	2.0e-05	36%
FL-Next	sp=Heat stress transcription factor B-4d; Oryza sativa subsp. japonica (Rice).	-	-	0.0	63%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q10KX8

Fln msg: Unexpected stop codon in the beginning of your sequence, Unexpected STOP codon at 3' end. Distance to subject end: 30 aas, your sequence is shorter than subject: 151 - 305

Fln protein: *EFRKIVRGRCEFANNLFRKGQSHFLSHIQRRNSSSVSTGQGPRTDHDKSLDQYSSSTVQNSEVLAVATSLSEENEILRRNNLLLLTEIARLQSLRSRDNEFLSGRSTCNPPLMDMNRSKMENASPSSSITDVAKEISMSPPKLFGVPLC*

Protein Length: 152

Fln nts: GTAGGAATTTCGCAAGATAGTTCGAGGGCGCTGCGAGTTTGCGAACAACTTATTCAGGAAGGGCCAGAGCCATTTCCTGTCTCATATCCAGAGAAGAAATTCCTCCAGTGTCTCCACCGGGCAGGGGCCACGGACGGATCATGATAAATCATTAGACCAATACTCATCATCGACAGTACAAAACTCCGAGGTTCTGGCAGTGGCCACTTCTCTGTCGGAGGAGAATGAGATATTAAGGAGAAATAATTTATTGCTTTTAACGGAGATTGCCCGCCTCCAGAGTCTGCGCAGCAGGGATAATGAGTTCTTGAGTGGGCGCAGTACCTGCAATCCTCCCTTGATGGACATGAACAGATCAAAAATGGAGAACGCCAGTCCTAGTAGTTCCATAACAGATGTTGCAAAAGAGATTAGTATGAGCCCACCAAAACTGTTTGGAGTTCCTCTCTGTTAGGAAAGTCAGAAAGTATTATTTTATATATATGACTTCCATGAATTTTGAGGTCATGTATTGAGCTCTATAGTTTCCCATTTGCAATAAAT

Fln Alignment:

sp_v1.1_unigene12757___FRKIVRGRCEFANNLFRKGQSHFLSHIQRRNSSSVSTGQGP
Q10KX8_______________FRKIVADRWEFANEFFRKGAKHLLSEIHRRKSSSCSQPQPP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain