SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene12261

Length: 850 nt

Origin of reads: Biogeco_1 Uagpf Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene12261 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Suppressor of actin, putative n=1 Tax=Ricinus communis RepID=B9T1J1_RICCO	-	-	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	suppressor of	-	-	80%

Source	ECs	Term	Type	e value	Identity
Blast2go	Phosphoinositide 5-phosphatase.	EC:3.1.3.36	-	0.0	80%

Source	KEGGs	Term	Identity
Blast2go	Inositol phosphate metabolism	00562	80%
Blast2go	Metabolic pathways	01100	80%
Blast2go	Phosphatidylinositol signaling system	04070	80%

Source	GOs	Term	Type	e value	Identity
Blast2go	phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	GO:0004439	Molecular Function	0.0	80%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Synaptojanin, N-terminal	IPR002013	-	0.0	80%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LL30

Fln msg: Separated hits, possible frame ERROR between 464 and 473, Distance to subject end: 78 aas, your sequence is shorter than subject: 283 - 573

Fln protein: SRRCIRRIGTRMWRRGADLEGHVANFIETEQLLEVDGFITSYLQVRGSIPVLWEQIVDLTYKPKLNIINTDETPKVVERHFRDLVQRYGPVLAVDLADRQGNEGPLSFAYEDAVQSLKHIRYVSFDFHRICGLVHFECLQLLYEKVAEDLKRQxxxxYFLRNPAGEIIEEQKGIVRVNCIDCLDRTNVTQQIGLFSTSECMLQHPDFHREFKILWANHGDVVSIQYSGTHALKGDFVRYGRQTVSGLIKDGFSALARYYLNNFHDGIRQDAMDLVAGHYTVSR

Protein Length: 284

Fln nts: TCTCACGGAGGTGTATTCGACGAATAGGAACAAGAATGTGGCGAAGGGGAGCCGACCTTGAAGGTCATGTTGCCAACTTCATAGAGACTGAACAACTGCTAGAGGTCGATGGATTTATAACATCATATTTGCAGGTGCGTGGTTCTATTCCAGTTTTGTGGGAACAGATTGTAGACCTTACGTACAAGCCAAAGTTGAATATAATTAATACTGATGAAACGCCAAAAGTTGTAGAACGACACTTTCGTGATCTTGTACAGAGATATGGACCTGTTTTAGCTGTCGATCTAGCTGATAGACAAGGCAATGAAGGTCCCTTAAGCTTCGCCTATGAGGATGCAGTGCAGAGTCTCAAACACATAAGATATGTTTCTTTTGATTTCCATCGCATCTGTGGACTCGTACACTTTGAGTGCTTGCAACTGCTTTATGAGAAAGTAGCGGAAGATCTTAAAAGACAAGGxxxxxxxxxATATTTTTTAAGAAATCCAGCTGGAGAAATTATAGAGGAACAAAAAGGAATCGTGAGAGTCAACTGCATTGATTGTTTGGATCGGACAAATGTCACTCAGCAGATAGGACTGTTCAGTACAAGCGAGTGCATGTTACAACATCCTGATTTTCACAGAGAATTCAAAATATTATGGGCAAATCATGGAGATGTGGTAAGCATACAGTACTCTGGGACACATGCTCTTAAGGGGGATTTTGTCAGATATGGAAGGCAAACTGTGTCGGGACTGATTAAGGATGGGTTCAGTGCTCTTGCTCGCTACTATTTGAATAATTTCCATGATGGTATTCGGCAGGATGCCATGGATCTAGTTGCTGGCCACTACACTGTTAGTAGA

Fln Alignment:

sp_v1.1_unigene12261___SRRCIRRIGTRMWRRGADLEGHVANFIETEQLLEVDGFITSYLQVRGSIPVLWEQIVDLTYKPKLNIINTDETPKVVERHFRDLVQRYGPVLAVDLADRQGNEGPLSFAYEDAVQSLKHIRYVSFDFHRICGLVHFECLQLLYEKVAEDLKRQGxxxYFLRNPAGEIIEEQKGIVRVNCIDCLDRTNVTQ-------------QIGLFSTSECMLQHPDFHREFKILWANHGDVVSIQYSGTHALKGDFVRYGRQTVSGLIKDGFSALARYYLNNFHDGIRQDAMDLVAGHYTVSR
B8LL30_______________SRRCIRRIGTRMWRRGADLEGHVANFIETEQLLEVDGFITSYLQVRGSIPVLWEQIVDLTYKPKLNIINTDETPKVVERHFRDLVQRYGPVLAVDLADRKGNEGPLSLAYADAVQSLKHIRYISFDFHRICGLVHFQRLQLLYEQLAEDLKKQGxxxYFLTNPAGEMIEEQKGIVRVNCIDCLDRTNVSQSFLAQKSFDSQLQRIGLFSTSECMLQHSNIHREFKILWANHGDEVSIQYSGTHALKGDFVRYGRQTVSGLIKDGLSALARYYLNNFHDGIRQDAMDLVAGHYTVSR

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
525		90		10	0.90298

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain