SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene12235

Length: 673 nt

Origin of reads: Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene12235 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Transferase domain containing protein	-	-	2.0e-16	31%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	50%
Blast2go	bahd family clade i	-	-	0.0	59%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Acyltransferases, Transferring groups other than amino-acyl groups.	EC:2.3.1.-	-	0.0	59%

Source	KEGGs	Term	Identity
Blast2go	Fatty acid biosynthesis	00061	59%
Blast2go	Tetracycline biosynthesis	00253	59%
Blast2go	Lysine degradation	00310	59%
Blast2go	Arginine and proline metabolism	00330	59%
Blast2go	Histidine metabolism	00340	59%
Blast2go	Tyrosine metabolism	00350	59%
Blast2go	Benzoate degradation	00362	59%
Blast2go	Lipopolysaccharide biosynthesis	00540	59%
Blast2go	Glycerophospholipid metabolism	00564	59%
Blast2go	Ether lipid metabolism	00565	59%
Blast2go	Glycosphingolipid biosynthesis - ganglio series	00604	59%
Blast2go	Toluene degradation	00623	59%
Blast2go	Naphthalene degradation	00626	59%
Blast2go	Aminobenzoate degradation	00627	59%
Blast2go	Ethylbenzene degradation	00642	59%
Blast2go	Butanoate metabolism	00650	59%
Blast2go	Methane metabolism	00680	59%
Blast2go	Limonene and pinene degradation	00903	59%
Blast2go	Diterpenoid biosynthesis	00904	59%
Blast2go	Carotenoid biosynthesis	00906	59%
Blast2go	Anthocyanin biosynthesis	00942	59%
Blast2go	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	59%
Blast2go	Isoquinoline alkaloid biosynthesis	00950	59%
Blast2go	Tropane, piperidine and pyridine alkaloid biosynthesis	00960	59%
Blast2go	Betalain biosynthesis	00965	59%
Blast2go	Biosynthesis of unsaturated fatty acids	01040	59%
Blast2go	Biosynthesis of type II polyketide backbone	01056	59%
Blast2go	Biosynthesis of terpenoids and steroids	01062	59%
Blast2go	Metabolic pathways	01100	59%
Blast2go	Biosynthesis of secondary metabolites	01110	59%

Source	GOs	Term	Type	e value	Identity
Blast2go	transferase activity, transferring acyl groups other than amino-acyl groups	GO:0016747	Molecular Function	0.0	59%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Transferase	IPR003480	-	0.0	59%
Blast2go	Chloramphenicol acetyltransferase-like domain	IPR023213	-	0.0	59%

Full-Lengther Next Prediction

SNPs (tot: 16)

Position	A %	C %	G %	T %	Probability
188	66		33		0.997452
198	33		66		0.997452
203	33	66			0.997452
205	66	33			0.997452
241		75		25	0.996473
262		75		25	0.996473
268		25	75		0.996473
325		25		75	0.996473
333		25		75	0.996473
378	66			33	0.997452
379			33	66	0.997452
519	66		33		0.997452
527		66	33		0.997452
615			50	50	1.0
616		50		50	1.0
631	50		50		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain