SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene12022

Length: 688 nt

Origin of reads: Biogeco_1

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene12022

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	exocyst complex component sec6, putative	-	-	73%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	89%
Blast2go	exocyst complex component	-	-	88%

Source	GOs	Term	Type	Identity
Blast2go	pollen germination	GO:0009846	Biological Process	88%
Blast2go	pollen tube growth	GO:0009860	Biological Process	88%
Blast2go	protein binding	GO:0005515	Molecular Function	88%
Blast2go	exocyst	GO:0000145	Cellular Component	88%
Blast2go	cytosol	GO:0005829	Cellular Component	88%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Exocyst complex component Sec6	IPR010326	-	0.0	88%

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
406	33		66		1.0

SSRs (tot: 1)

Start position	End position	Sequence	Length
198	211	ATA ATA ATA ATA AT	14

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain