SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene11992

Length: 1175 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene11992

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	serine/threonine protein kinase, putative (EC:2.7.12.2)	-	-	84%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	39%
Blast2go	serine threonine kinase	-	-	94%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring phosphorous-containing groups, Protein-tyrosine kinases.	EC:2.7.10.-	-	0.0	94%
Blast2go	Transferases, Transferring phosphorous-containing groups, Protein-serine/threonine kinases.	EC:2.7.11.-	-	0.0	94%

Source	GOs	Term	Type	Identity
Blast2go	auxin biosynthetic process	GO:0009851	Biological Process	94%
Blast2go	protein phosphorylation	GO:0006468	Biological Process	94%
Blast2go	protein tyrosine kinase activity	GO:0004713	Molecular Function	94%
Blast2go	ATP binding	GO:0005524	Molecular Function	94%
Blast2go	protein serine/threonine kinase activity	GO:0004674	Molecular Function	94%
Blast2go	nucleus	GO:0005634	Cellular Component	94%
Blast2go	chromosome, centromeric region	GO:0000775	Cellular Component	94%
Blast2go	mitochondrion	GO:0005739	Cellular Component	94%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LR19

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 91 aas, your sequence is shorter than subject: 249 - 902

Fln protein: VPDNVIREDPSTKYELLDELGKGSYGAVYKARDLKTSELVAIKVISLCEGEEGYEEIRGEIEMLQQCNHPNVVRYFGSYQSEEYLWIVMEYCGGGSVSDLMNITYEPLEEHQIAYICREALKGLSYLHSIFKVHRDIKGGNILLTEQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGAPPRANVHPMRVLFMISGEPAPMLEDKEKWSLVFHDLLLNA*

Protein Length: 250

Fln nts: CAGTTCCAGACAATGTAATCAGAGAAGATCCATCTACGAAGTACGAGTTGCTTGATGAGCTTGGAAAAGGGTCTTATGGAGCCGTCTATAAAGCTAGAGATCTCAAAACTTCAGAACTGGTTGCCATCAAAGTGATCTCCTTATGTGAAGGGGAGGAGGGCTATGAGGAGATACGGGGAGAAATTGAAATGCTACAGCAATGCAATCACCCAAATGTAGTACGGTACTTTGGAAGCTATCAGAGTGAGGAGTATCTCTGGATAGTAATGGAGTATTGTGGGGGAGGAAGTGTTTCTGATTTGATGAACATTACTTACGAACCCTTGGAGGAACATCAAATCGCCTACATTTGTAGGGAAGCTCTCAAGGGCTTGTCTTATTTACATTCAATTTTCAAGGTTCACCGTGATATAAAGGGCGGTAACATATTGCTTACAGAGCAGGGGGAGGTCAAACTTGGGGACTTTGGCGTTGCAGCACAGCTGACTAGGACAATGTCGAAACGTAATACGTTTATTGGTACTCCACACTGGATGGCTCCTGAAGTGATTCAGGAGAGTCGCTATGATGGAAAGGTAGATGTATGGGCGCTAGGAGTGTCTGCAATAGAGATGGCAGAGGGTGCTCCACCTAGAGCCAACGTGCATCCAATGAGAGTGCTGTTCATGATATCAGGTGAGCCTGCACCAATGCTAGAGGACAAGGAGAAATGGTCTCTGGTTTTCCATGATTTATTGCTAAATGCCTAACAAAGGAGCCTCGGCTACGGCCTACAGCCACTGAAATGCTGAAGCATAAGTTCATCGAAAAATGCAAGGGAGAAGCTGCTTCCATGTTACCAAAAATAGAGATTGCAAGGCAAACAAAAATTGAAATGGCTGCACAAGCATTTACCCAAGGGCCAGGAACATCATCTTCGGGTGGTGGACAATGGTCATGGGAGAAAGGACAGACATTGAAAATGAATGAAACTTATGGAGGAACAGTTCCCCTTTCTGAAGTAGCAGATGACCTAATTCCAGCTAGCACTGCTGGAAGGTCAGCAACAGGTCCTGATGAAGAGGCACAGGCAGAAGGTGAGTTTGGGACAATTGTAGTTCACAAAACTGCTTCACCAATTGTGTTAACAAAAGATTTGAATGAGAGTGGTCGTATATCAAGTACTGAGAACATCA

Fln Alignment:

sp_v1.1_unigene11992___LGKGSYGAVYKARDLKTSELVAIKVISLCXXXXXXXXXXXXXX----MLQQCNHPNVVRYFGSYQSEEYLWIVMEYCGGGSVSDLMNITYEPLEEHQIAYICREALKGLSYLHSIFKVHRDIKGGNILLTEQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESR--YDGKVDVWALGVSAIEMAEGAPPRANVHPMRVLFMISGEPAPMLED
B8LR19_______________LGCGTFGTVYVGFNRETGDMCAMKEVPLVPDDSKSSESIKQLEQEINLLSGLEHPNIVQYYGSETVEDLFYIYLEYVPGGSIYKLVN-DYGPLEEPVIRIYTRQILSGLAYLHSMNTVHRDIKGGNILVDTYGRVKLADFGMAKHINGPATPL-SLKGSPYWMAPEVLMQKNTGHDLAVDIWSLGCTVIEMATGKPPWSEYEGAAAMFKVFKSEVPPIPD

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
915	75		25		0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain