SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene11819

Length: 1186 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene11819

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	SWP; SWP (STRUWWELPETER)	-	-	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	69%
Blast2go	af466359_1 swp1	-	-	72%

Source	GOs	Term	Type	Identity
Blast2go	regulation of transcription from RNA polymerase II promoter	GO:0006357	Biological Process	72%
Blast2go	positive regulation of cell proliferation	GO:0008284	Biological Process	72%
Blast2go	positive regulation of cellular transcription, DNA-dependent	GO:0045941	Biological Process	72%
Blast2go	RNA polymerase II transcription mediator activity	GO:0016455	Molecular Function	72%
Blast2go	mediator complex	GO:0016592	Cellular Component	72%

Full-Lengther Next Prediction

SNPs (tot: 6)

Position	A %	C %	G %	T %	Probability
143			33	66	0.997452
145		66	33		0.997452
147	33			33	0.997753
709	85		14		0.993533
814			50	50	1.0
824		50		50	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain