SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene11728

Length: 797 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene11728

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Protein CPR-5, putative	-	-	3.0e-35	51%
FL-Next	sp=Protein CPR-5; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	37%
Blast2go	protein	-	-	4.51825e-36	61%

Source	GOs	Term	Type	e value	Identity
Blast2go		GO:0023034	Biological Process	4.51825e-36	61%
Blast2go	trichome morphogenesis	GO:0010090	Biological Process	4.51825e-36	61%
Blast2go	photoperiodism, flowering	GO:0048573	Biological Process	4.51825e-36	61%
Blast2go	cellular response to organic substance	GO:0071310	Biological Process	4.51825e-36	61%
Blast2go	systemic acquired resistance	GO:0009627	Biological Process	4.51825e-36	61%
Blast2go	leaf senescence	GO:0010150	Biological Process	4.51825e-36	61%
Blast2go	plastid	GO:0009536	Cellular Component	4.51825e-36	61%
Blast2go	membrane	GO:0016020	Cellular Component	4.51825e-36	61%

Full-Lengther Next Prediction

SNPs (tot: 13)

Position	A %	C %	G %	T %	Probability
348	80	20			0.999996
354	10	10		10	0.922578
357		90	10		0.90298
359		20	80		0.999996
360	20	80			0.999996
361		10		90	0.90298
363		10		90	0.90298
364	10		90		0.90298
628	66		33		0.997452
685	62		37		1.0
686		75		25	1.0
692		62		37	1.0
707		37		62	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain