SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene11721

Length: 1170 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene11721

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	GRF zinc finger family protein n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXT9_ORYSJ	-	-	8.0e-36	92%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	100%
Blast2go	ubiquitin-like protein 5	-	-	1.45174e-35	98%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Ubiquitin	IPR000626	-	1.45174e-35	98%
Blast2go	Ubiquitin supergroup	IPR019955	-	1.45174e-35	98%

Full-Lengther Next Prediction

SNPs (tot: 62)

Position	A %	C %	G %	T %	Probability
86	12		87		0.992554
112		87		12	0.992554
128		12		87	0.992554
139	88		11		0.923564
143	11		88		0.923564
162		11		88	0.923564
164		11		88	0.923564
173		11	88		0.923564
205	14		85		0.993533
218	87			12	0.992554
219		87	12		0.992554
220	87		12		0.992554
223	87			12	0.992554
227			87	12	0.992554
243	87			12	0.992554
260	85	14			0.993533
261	85		14		0.993533
265		85		14	0.993533
273			14	85	0.993533
278		14	85		0.993533
298			83	16	0.994512
299			83	16	0.994512
304	14		85		0.993533
306			14	85	0.993533
308			14	85	0.993533
309			14	85	0.993533
329	12			87	0.992554
331	75		25		1.0
333		87	12		0.992554
354	11			88	0.923564
357			12	87	0.992554
358			12	87	0.992554
379		11	88		0.923564
380	88		11		0.923564
384	88			11	0.923564
386	11		88		0.923564
387		11		88	0.923564
388		11	88		0.923564
389			88	11	0.923564
395	88		11		0.923564
396	88			11	0.923564
398	11		88		0.923564
399	88	11			0.923564
679		10		90	0.90298
680	88			11	0.923564
681	88		11		0.923564
682	88			11	0.923564
683	88	11			0.923564
685		11		88	0.923564
691	11	88			0.923564
694		11		88	0.923564
708		12	87		0.992554
758		10		90	0.90298
760		88		11	0.923564
762	88		11		0.923564
764	11			88	0.923564
765		11		88	0.923564
766		11		88	0.923564
772	88	11			0.923564
774			11	88	0.923564
779		12	87		0.992554
783	14			85	0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain