SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene11300

Length: 1799 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene11300

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	FU; FU (FUSED); protein serine/threonine kinase; K06228 fused [EC:2.7.11.1]	-	-	48%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	53%
Blast2go	atp binding	-	-	67%

Source	ECs	Term	Type	e value	Identity
Blast2go	Calcium/calmodulin-dependent protein kinase.	EC:2.7.11.17	-	0.0	67%

Source	ECs	Term	Type	e value	Identity
AutoFact	Non-specific serine/threonine protein kinase.	EC:2.7.11.1	-	0.0	48%

Source	GOs	Term	Type	Identity
Blast2go	auxin biosynthetic process	GO:0009851	Biological Process	67%
Blast2go	protein phosphorylation	GO:0006468	Biological Process	67%
Blast2go	cytokinesis by cell plate formation	GO:0000911	Biological Process	67%
Blast2go	embryo sac cellularization	GO:0009558	Biological Process	67%
Blast2go	calmodulin-dependent protein kinase activity	GO:0004683	Molecular Function	67%
Blast2go	ATP binding	GO:0005524	Molecular Function	67%
Blast2go	phragmoplast	GO:0009524	Cellular Component	67%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Armadillo-like helical	IPR011989	-	0.0	67%
Blast2go	Armadillo-type fold	IPR016024	-	0.0	67%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: tr_plants

Fln subject: F6HEG7

Fln msg: Overlapping hits, possible frame ERROR between 1104 and 1104, your sequence is shorter than subject: 520 - 1348

Fln protein: DKSNTNDQREERSTLSNGTGMLTHWHGLRDGCVGLLETRVKWGGPLAVEQACSNGIPGFIVSLLVDQPRKLNQEVGGFLEDKVGLSPTGLVWALSAIAYCLTGGAFRDILLKKEPLSIILGLMSELHLRYIKLWDGHGGGSAGLRDLVNEIINILAFPFIVTQQCPGLPSTSASISSGLLLNSNSPGGRVGTENSYIAKAVAENMPHYLQMLHEVHISVTILKCLEHLDAKDIGRPVAFIAKMVSSKTLAIELLNDGLLAPSTIEKMLDSASPKEVTLDLLMIISDLARMSKDFYEHIEKANMFDALRQFLSHDDANIRSKACSALGNMCRHTPYFYNSLVKHDMINLLIDRCADPDRRTRKFACFAxxAMAAYHNDYLYEQLRRSIPNLKNLLLGEEEDKTKANAAGALSNLVRNSSRLCEDIISKGAMEALLRVISDYSTTASTPGRKDASNESPLKIALFSLGNMCIHAPCRQFLRSQEFFHVLMHLRKSPDPTITKYIARITSKFPDASTPSPAR*

Protein Length: 521

Fln nts: GATAAGTCAAACACAAATGATCAGAGAGAAGAGCGGAGTACTTTGAGTAATGGAACTGGTATGCTCACACATTGGCATGGACTCAGAGATGGTTGTGTTGGTTTACTTGAAACAAGAGTTAAATGGGGAGGTCCACTGGCTGTAGAGCAAGCATGCTCAAATGGTATTCCTGGGTTTATAGTTTCATTATTGGTAGATCAGCCTAGAAAGTTAAATCAGGAAGTGGGTGGTTTCTTAGAGGATAAAGTTGGTTTATCTCCAACAGGTCTTGTTTGGGCACTTTCTGCTATAGCATACTGCTTAACAGGTGGTGCCTTCCGTGATATTCTACTAAAGAAGGAGCCTCTCAGTATAATCTTGGGTTTGATGAGTGAACTGCATCTCAGGTACATAAAACTTTGGGATGGGCATGGCGGTGGCAGTGCTGGTTTGAGAGACTTGGTGAATGAAATTATCAATATTTTGGCATTTCCTTTCATTGTCACACAGCAATGTCCTGGTTTACCCTCAACATCTGCATCCATTAGTAGTGGTCTTCTTCTCAACTCCAACTCTCCAGGTGGAAGAGTGGGTACTGAAAATTCATATATTGCAAAAGCAGTTGCTGAGAATATGCCCCATTATTTACAAATGCTTCATGAGGTTCATATTTCTGTTACTATTTTGAAGTGCTTGGAGCATTTGGATGCGAAAGACATTGGAAGACCTGTTGCTTTTATTGCCAAAATGGTTAGCTCTAAGACTCTTGCCATTGAACTTCTCAATGACGGTTTATTGGCCCCCAGTACAATAGAGAAAATGCTTGACAGTGCAAGTCCCAAGGAAGTTACGTTGGATCTCTTGATGATAATTTCAGATTTGGCCCGAATGTCGAAGGACTTTTATGAACACATAGAAAAAGCAAATATGTTTGATGCTCTCAGACAATTTTTGAGCCATGATGATGCTAACATACGGTCAAAGGCATGCAGTGCCTTGGGCAATATGTGTCGTCACACTCCTTATTTCTACAATTCTCTTGTGAAGCATGATATGATTAATCTTCTCATTGATAGATGTGCAGACCCTGATCGACGTACCAGAAAATTTGCCTGCTTTGCGxxxxxxGCAATGGCTGCTTATCACAATGATTATCTATATGAGCAACTTCGTCGGTCCATACCAAATCTTAAAAATCTTTTGCTAGGGGAGGAAGAAGACAAAACTAAAGCAAATGCAGCAGGTGCTTTGAGCAATCTTGTTCGGAATTCAAGCAGACTGTGTGAGGACATTATATCAAAAGGGGCCATGGAGGCATTGCTGAGAGTTATCTCAGATTACTCAACAACTGCATCAACACCGGGAAGAAAGGATGCAAGCAACGAGTCACCTCTCAAGATTGCCCTTTTCTCCCTTGGCAATATGTGCATCCACGCACCATGTAGGCAATTCCTTCGGTCCCAGGAATTCTTCCATGTTCTAATGCACCTCCGGAAGTCTCCTGATCCGACAATTACAAAATATATAGCTCGCATCACTAGCAAGTTTCCTGATGCCTCTACTCCGTCCCCAGCTAGATGATCTATTCTTTTACAATGTTCCGATTTTCTTGTTTGTAACATAAAGAATTCACATGTAATATTCATGATCCTGGAGGTATTCCTCATGTAACATTGTCTTTTGAGCTGCTAAATATAACATTGCGCTTATGATGGTAAGTGTTGAGCTGCCAGATATAACGCTGTGCTAGTGTTATGATGGAAAATTAAGATGGCAGTGCATTTGTAATCCTTTTTTACTATCAGAAATGCAACATAAGTT

Fln Alignment:

sp_v1.1_unigene11300___TNDQREERSTLSNGTGMLTHWHGLRDGCVGLLETRVKWGGPLAVEQACSNGIPGFIVSLLVDQPRKLNQEVGGFLEDKVGLSPTGLVWALSAIAYCLTGGA--FRDILLKKEPLSIILGLMSELHLRYIKLWDGHGGGSAGLRDLVNEIINILAFPFIVTQQCPGLPSTXXXXXXXXXXXXXXXXXRVGTENSYIAKAVAENMPHYLQMLHEVHISVTILKCLEHLDAKDIGRPVAFIAKMVSSKTLAIELLNDGLLAPSTIEKMLDSASPKEVTLDLLMIISDLARMSKDFYEHIEKANMFDALRQFLSHDDANIRSKACSALGNMCRHTPYFYNSLVKHDMINLLIDRCADPDRRTRKFACFAxAMAAYHNDYLYEQLRRSIPNLKNLLLGEEEDKTKANAAGALSNLVRNSSRLCEDIISKGAMEALLRVISDYSTTASTPGRKDASNESPLKIALFSLGNMCIHAPCRQFLRSQEFFHVLMHLRKSPDPTITKYIARITSKFPDA
F6HEG7_______________SGDENELGSTIPNG--MLSYWHGLRDGCVGLLESRLKWGGALAVQQLCASGIPQLLINLLYNNHSKACPQGIDSTIDRVGLSSVGVVWTVSSICHCLSGGALTFRQTLVRNEHIKLISCLISDVHLKLVRVWGGPGGGKDGVRDVINAVIDLLAFPFVAVQNAPGLPSATASVNSGFLLNMGSPGGRVCVEDKDMVKAIEDDMGKYIKILMEVGVPGIILRCLEYMELKDMGRPVAFLAKMASHRLLAVQLVGKGLLDPKGMRRLLDCSCPREVTLDVLMIISDLARMDKAFYEYINGACILEFLREFLTHEDPNVRAKACSAIGNMCRHSSYFYGSLARHHIISLLIDRCADPDKRTRKFACFAxGNAAYHNDNLYEELKRSIPQLANLLLSAEEDKTKANAAGALSNLIRNSNKLCEDIVSKGALQALLKLVADCSAVALNPTRKDAINESPLKIALFSLAKMSSHQPCRQFIRSSELFPVIGRLRQSPESTIANYASLIINKVSEA

SNPs (tot: 19)

Position	A %	C %	G %	T %	Probability
1329	88		11		0.923564
1356		10		90	0.90298
1359	90		10		0.90298
1360	90			10	0.90298
1364	90	10			0.90298
1367	76			23	1.0
1370		84	15		0.999986
1375		84		15	0.999986
1376			15	84	0.999986
1377		84	15		0.999986
1378	84	15			0.999986
1379	84			15	0.999986
1383		15		84	0.999986
1384	16		83		0.999991
1386		81		18	0.999994
1388	10			90	0.90298
1479	50		50		1.0
1485		33		66	1.0
1781		50		50	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain