SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene11296

Length: 1031 nt

Origin of reads: Biogeco_1 Biogeco_2 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene11296

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	nodulin MtN3 family protein	-	-	7.00649e-44	42%
FL-Next	sp=Bidirectional sugar transporter SWEET1b; Oryza sativa subsp. indica (Rice).	-	-	0.0	45%
Blast2go	nodulin 3 family protein	-	-	0.0	66%

Source	GOs	Term	Type	e value	Identity
Blast2go	membrane	GO:0016020	Cellular Component	0.0	66%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	0.0	66%

Source	InterPros	Term	Type	e value	Identity
Blast2go	RAG1-activating protein-1-related	IPR004316	-	0.0	66%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: sp_plants

Fln subject: B8AYH1

Fln msg:

Fln protein: MALSSQVVVGVIGNITSLALYLSPMATFWGIYAQKSTQEYSGYPYVFTLFNCALGLLYGSPFVKPHSTMILTINGAGFLLETFYVMSFLTFASRKKKVNTIRLSCGLIMAFVMEAAITIFVLHTYRVRQVVVGSVGVILSIIMYASPLSVVKVVIRTKSVECMPFLLSLFNFINALAWVAYAIVTRDLFICVPSGIGSVLGMIQLVVYFIYRKSRLIVSPASTNEFSQTKHIDMNEVDLTVQKQIELNAVDVTVQKIEAEKSTFAIVISIDPTIADLV*

Protein Length: 280

Fln nts: ATGGGGAATTAACGTTGGCCGATCGGTCATTTCATAGTATTTGTTTTTGTTAGGTCAAC_-_ATGGCATTGTCTTCTCAGGTTGTCGTTGGAGTTATTGGAAATATAACTTCACTGGCGCTATACTTGTCTCCCATGGCAACCTTTTGGGGAATATATGCGCAGAAATCTACGCAGGAATATTCTGGGTATCCGTATGTGTTCACACTGTTTAACTGTGCTCTTGGGCTACTCTATGGAAGCCCATTCGTTAAACCCCACAGTACTATGATCCTTACCATCAATGGTGCAGGCTTTCTTCTCGAAACATTTTATGTCATGTCCTTTCTCACTTTTGCTTCCCGAAAGAAGAAGGTGAACACAATAAGGCTGAGCTGTGGTTTGATAATGGCCTTCGTCATGGAAGCTGCTATTACAATTTTTGTGCTGCACACTTATCGTGTAAGACAGGTGGTAGTAGGCAGTGTGGGTGTGATTTTGTCCATTATCATGTATGCTTCGCCATTATCTGTTGTGAAAGTTGTGATTAGAACTAAAAGTGTAGAGTGCATGCCATTCTTACTCTCTCTATTCAACTTCATAAATGCACTAGCATGGGTTGCATACGCTATAGTCACTCGGGATCTTTTCATTTGTGTGCCCAGTGGTATTGGCTCTGTTCTGGGAATGATCCAGCTTGTTGTGTACTTCATTTATAGAAAGTCAAGGCTAATTGTATCACCTGCATCTACCAACGAATTTTCTCAGACCAAGCATATAGACATGAATGAAGTGGATCTAACAGTTCAGAAACAAATAGAGCTGAATGCAGTGGATGTAACAGTTCAGAAAATAGAAGCCGAGAAATCAACTTTTGCCATAGTAATTTCAATAGATCCGACCATTGCAGATCTGGTGTAA___AATATATTGAGTCTGGTTTCACCATCGGGAGTCATTAGCCACTTTTCTAAGCCGCATTTACTTAACACGGTGGTTATAATTGTCGTCCTTGACAAGGGATCCGCCACTGACTACTTATCGTATTTACTGAGTTTG

Fln Alignment:

sp_v1.1_unigene11296___SQVVVGVIGNITSLALYLSPMATFWGIYAQKSTQEYSGYPYVFTLFNCALGLLYGSPFVKPHSTMILTINGAGFLLETFYVMSFLTFAS-RKKKVNTIRLSCGLIMAFVMEAAITIFVLHTYXXXXXXXXXXXXILSIIMYASPLSVVKVVIRTKSVECMPFLLSLFNFINALAWVAYAIVTRDLFICVPSGIGSVLGMIQLVVYFIYRKSR
B8AYH1_______________AKFLFGVSGNVIALFLFLSPVPTFWRIIRRKSTEDFSGVPYNMTLINCLLSAWYGLPFVSPNNILVSTINGAGAVIETAYVVVFLVFASTHKTRLRTLGLAAAVASVFAAVALVSLLALHG-QHRKLLCGVAATVCSICMYASPLSIMRLVIKTKSVEYMPFLLSLAVFLCGTSWFIYGLLGRDPFVTIPNGCGSFLGAVQLVLYAIYRNNK

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
715		12		87	0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain