SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene11249

Length: 822 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene11249

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	GTP-binding protein enga, putative n=1 Tax=Ricinus communis RepID=B9RIC2_RICCO	-	-	2.0e-30	47%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	36%
Blast2go	gtp-binding protein	-	-	2.998e-30	73%

Source	GOs	Term	Type	e value	Identity
Blast2go	embryo development ending in seed dormancy	GO:0009793	Biological Process	2.998e-30	73%
Blast2go	GTP binding	GO:0005525	Molecular Function	2.998e-30	73%
Blast2go	plastid	GO:0009536	Cellular Component	2.998e-30	73%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Ferrous iron transport protein B, N-terminal	IPR011619	-	2.998e-30	73%

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
404		80		20	0.995493
405			20	80	0.995493
407		80	20		0.995493
569	80		20		0.995493
610			16	83	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain