SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene11008

Length: 945 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene11008

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	PH domain containing protein	-	-	60%
FL-Next	tr=Putative uncharacterized protein; Ricinus communis (Castor bean).	-	-	75%
Blast2go	ph domain containing protein	-	-	84%

Source	GOs	Term	Type	Identity
Blast2go	signal transduction	GO:0007165	Biological Process	84%
Blast2go	phosphatidylinositol binding	GO:0035091	Molecular Function	84%
Blast2go	plant-type cell wall	GO:0009505	Cellular Component	84%
Blast2go	plastid	GO:0009536	Cellular Component	84%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Pleckstrin homology domain	IPR001849	-	0.0	84%
Blast2go	Pleckstrin homology-like domain	IPR011993	-	0.0	84%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: tr_plants

Fln subject: B9S2Z9

Fln msg: Distance to subject end: 229 aas, your sequence is shorter than subject: 276 - 499

Fln protein: MANSADHRPSPMVDQVNDTENSLEKIKKQLNSASGRTLLQGPLLKRSETLRKWNERWVTLDPTTGKLDYRVRRNDLAPKGSIIFDANSTITVSPINFHGLQKYDGCCFYVGTPQKKEYFLCAETPGAAKAWVATLRASQLVLKAHREAVNSLSGNGSSKLGTVAAVVAAANSTAKESAKEIGAAMQISMKAALGAVTNQANDGYMDDLTIMKETLKVKDEELHQLVRELRARDSTIKEIADKLSETAEAAEAAAIAAHAMDKERKAAVAELERLSI

Protein Length: 277

Fln nts: ATGGGGAGAAATGCCAGTGTGTCAAATGCCAGGGTCTATTTCATCTCCTAACCGTATCAAACCGCATATTTTGCGTTGATTTTTTTAACCTTCTCTGCAATTGGGTCGAAATCCGTC_-_ATGGCAAACAGCGCCGACCATCGGCCATCTCCCATGGTGGATCAAGTAAATGATACGGAGAACAGTTTGGAGAAGATCAAGAAACAGCTAAATTCGGCTTCTGGAAGAACTCTGTTGCAAGGGCCGCTTCTGAAGCGATCAGAGACGCTCCGGAAATGGAATGAGCGATGGGTGACTTTGGATCCAACCACTGGAAAATTGGATTATAGAGTTCGGAGGAATGATTTGGCACCCAAAGGGTCAATAATATTTGATGCAAATAGCACAATCACGGTGTCCCCAATTAATTTTCATGGTCTCCAGAAGTATGACGGTTGTTGTTTCTATGTTGGCACTCCACAGAAAAAGGAATACTTTCTTTGTGCTGAAACTCCTGGTGCTGCTAAAGCTTGGGTAGCAACATTACGGGCATCACAGTTGGTATTGAAAGCACACAGGGAAGCTGTAAACTCATTGAGTGGAAATGGCTCTAGCAAACTTGGAACAGTAGCAGCAGTGGTTGCTGCTGCCAATTCAACTGCAAAGGAATCTGCAAAAGAGATTGGAGCAGCAATGCAGATTTCTATGAAGGCAGCTCTGGGTGCTGTCACCAATCAAGCAAATGATGGGTATATGGATGATCTGACAATTATGAAGGAAACACTTAAAGTGAAGGATGAAGAACTGCACCAGTTAGTCAGAGAGCTTAGAGCACGGGATTCAACAATTAAAGAAATCGCTGACAAGCTGTCTGAGACTGCTGAAGCTGCTGAAGCTGCAGCAATAGCTGCCCATGCTATGGACAAAGAGCGAAAGGCTGCAGTAGCAGAACTTGAACGCTTATCTATA

Fln Alignment:

sp_v1.1_unigene11008___ANSADHRPSPMVDQVNDTENSLEKIKKQLNSASGRTLLQGPLLKRSETLRKWNERWVTLDPTTGKLDYRVRRNDLAPKGSIIFDANSTITVSPINFHGLQKYDGCCFYVGTPQKKEYFLCAETPGAAKAWVATLRASQLVLKAHREAVXXXXXXXXXXXXTXXXXXXXXNSTAKESAKEIGAAMQISMKAALGAVTNQANDGYMDDLTIMKETLKVKDEELHQLVRELRARDSTIKEIADKLSXXXXXXXXXXXXXXXMDKERKAAVAELERLS
B9S2Z9_______________SNGASTRPV-------DADNSLERIKRQLASGSGRNLLHGPLLKRSETLRKWNERWVILDPTTGKMEYKTRRNEPAIKGTIIFDANSTITVSPVNFHGLPKYDGCCFYIGTPQKKDYFLCAETPGAARAWVATLHATQLVLKAHKEAVNSLSGTGSAKLGTVATVVAAANSTALECSKEIEAAMQISLRNALGMVNNRITDGPMDDLAIMKETLKVKDEELQNLARDLRARDSTIREIADKLSETAEAAEAAASAAHTMDEQRRIACAEIERLS

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
647	33	66			0.997452
935		88		11	0.991528

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain