SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene10865

Length: 567 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene10865

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	regulatory protein RecX family protein	-	-	5.0e-10	56%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	63%
Blast2go	unnamed protein product [Vitis vinifera]	-	-	6.73936e-11	85%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Regulatory protein RecX	IPR003783	-	6.73936e-11	85%

Full-Lengther Next Prediction

SNPs (tot: 43)

Position	A %	C %	G %	T %	Probability
39	66	33			0.997452
40	66		33		0.997452
41		66		33	0.997452
42	66	33			0.997452
43	66		33		0.997452
46	33		66		0.997452
48		33		66	0.997452
50		66		33	0.997452
54		33	66		0.997452
55	66			33	0.997452
57			66	33	0.997452
58	83	16			0.994512
59	83			16	0.994512
60	66	16	16		0.988813
61			12	87	0.992554
62		12	87		0.992554
63	12	87			0.992554
131	88	11			0.923564
132			11	88	0.923564
134	88	11			0.923564
137	11	88			0.923564
140	88			11	0.923564
142		88	11		0.923564
147		11	88		0.923564
148			88	11	0.923564
209	88	11			0.923564
210	88		11		0.923564
212		11		88	0.923564
213			11	88	0.923564
215	88		11		0.923564
217		11		88	0.923564
218		11	88		0.923564
219	88			11	0.923564
221	88		11		0.923564
222		77	11	11	0.968132
224	88			11	0.923564
225	88		11		0.923564
226			88	11	0.923564
227	88	11			0.923564
290	28		57		1.0
319			85	14	0.993533
478	25	75			0.996473
480	75	25			0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain