SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene10845

Length: 862 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene10845 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ATP-binding region, ATPase-like domain-containing protein	-	-	2.0e-18	65%
FL-Next	tr=Predicted protein; subsp. trichocarpa).	-	-	0.0	62%
Blast2go	zinc finger	-	-	1.52831e-19	73%

Source	GOs	Term	Type	e value	Identity
Blast2go	ATP binding	GO:0005524	Molecular Function	1.52831e-19	73%
Blast2go	chloroplast envelope	GO:0009941	Cellular Component	1.52831e-19	73%

Full-Lengther Next Prediction

SNPs (tot: 28)

Position	A %	C %	G %	T %	Probability
650	80			20	0.999996
653	25			75	1.0
683	87	12			0.992554
684	87	12			0.992554
714	85		14		0.993533
717	85	14			0.993533
720		14	85		0.993533
721		14	85		0.993533
722	14			85	0.993533
725		85	14		0.993533
730			14	85	0.993533
807			80	20	0.995493
809	20			80	0.995493
810			20	80	0.995493
811	50	25			0.995533
812		25		75	0.996473
814	25		75		0.996473
815	75			25	0.996473
818		66	33		0.997452
821	33			66	0.997452
822	33			66	0.997452
823			33	66	0.997452
824		66	33		0.997452
826		33		66	0.997452
828	66	33			0.997452
829			33	66	0.997452
830	33	66			0.997452
831		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain