SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene10833

Length: 597 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene10833

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	CPD photolyase n=1 Tax=Cucumis sativus RepID=Q9AVI6_CUCSA	-	-	89%
FL-Next	sp=Deoxyribodipyrimidine photo-lyase; Oryza sativa subsp. japonica (Rice).	-	-	86%
Blast2go	cpd photolyase	-	-	92%

Source	ECs	Term	Type	e value	Identity
Blast2go	Deoxyribodipyrimidine photo-lyase.	EC:4.1.99.3	-	0.0	92%

Source	GOs	Term	Type	e value	Identity
Blast2go	DNA repair	GO:0006281	Biological Process	0.0	92%
Blast2go	deoxyribodipyrimidine photo-lyase activity	GO:0003904	Molecular Function	0.0	92%

Full-Lengther Next Prediction

SNPs (tot: 32)

Position	A %	C %	G %	T %	Probability
137	83	16			0.994512
139		83		16	0.994512
140		16		83	0.994512
141	83		16		0.994512
143	83		16		0.994512
144	16			83	0.994512
145	83	16			0.994512
146		16		83	0.994512
149	83		16		0.994512
150	83		16		0.994512
151	83	16			0.994512
154	83			16	0.994512
158		16	83		0.994512
162	16		83		0.994512
183	85	14			0.993533
184	85		14		0.993533
186		14	85		0.993533
188	85			14	0.993533
189			14	85	0.993533
191		14		85	0.993533
192		14	85		0.993533
197		14		85	0.993533
277	82		17		1.0
282		17	82		1.0
283		17	82		1.0
288	82	5		11	0.999919
289	81		12	6	0.999943
290			87	12	0.999964
292		18	81		1.0
293	87			12	0.999964
294	81	18			1.0
422			84	15	0.999986

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain