SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene10710

Length: 772 nt

Origin of reads: Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene10710

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	PREDICTED: similar to oligopeptide transporter OPT family protein n=1 Tax=Vitis vinifera RepID=UPI0001985D33	-	-	70%
FL-Next	sp=Oligopeptide transporter 3; Arabidopsis thaliana (Mouse-ear cress).	-	-	68%
Blast2go	oligopeptide transporter opt family	-	-	84%

Source	GOs	Term	Type	Identity
Blast2go	transmembrane transport	GO:0055085	Biological Process	84%
Blast2go	membrane	GO:0016020	Cellular Component	84%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	84%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Oligopeptide transporter OPT superfamily	IPR004813	-	0.0	84%

Full-Lengther Next Prediction

SNPs (tot: 15)

Position	A %	C %	G %	T %	Probability
169	33		66		1.0
220		14	85		0.993533
221			14	71	0.984337
222			14	85	0.993533
225			71	28	1.0
227	14	71		14	0.984337
232	14			85	0.993533
237		85		14	0.993533
238	85		14		0.993533
243	85	14			0.993533
244	85			14	0.993533
245	85	14			0.993533
300		37		62	1.0
338	90		10		0.90298
339			10	90	0.90298

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain