SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene10691

Length: 872 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene10691

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Anthranilate phosphoribosyltransferase-like protein n=2 Tax=Arabidopsis RepID=Q9LXU2_ARATH	-	-	66%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	71%
Blast2go	c2 domain-containing protein	-	-	85%

Source	GOs	Term	Type	e value	Identity
Blast2go	cell wall	GO:0005618	Cellular Component	0.0	85%
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	0.0	85%

Full-Lengther Next Prediction

SNPs (tot: 21)

Position	A %	C %	G %	T %	Probability
37			33	66	0.997452
190	75		25		0.996473
191			25	75	0.996473
476		16		83	0.994512
478			83	16	0.994512
481	83			16	0.994512
484		16		66	0.988813
488		80		20	0.995493
494		80		20	0.995493
495		20		80	0.995493
501	20	80			0.995493
513		10	90		0.90298
514			10	90	0.90298
520			10	90	0.90298
521	10			90	0.90298
522		10	90		0.90298
525	90			10	0.90298
531	90			10	0.90298
534	10		90		0.90298
538	10	90			0.90298
651	28		71		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain