SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene10637

Length: 896 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene10637

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Probable protein phosphatase 2C 72 n=4 Tax=Oryza sativa RepID=P2C72_ORYSJ	-	-	9.80909e-45	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	50%
Blast2go	protein phosphatase 2c	-	-	2.8026e-45	70%

Source	ECs	Term	Type	e value	Identity
Blast2go	Phosphoprotein phosphatase.	EC:3.1.3.16	-	2.8026e-45	70%

Source	GOs	Term	Type	e value	Identity
Blast2go	phosphoprotein phosphatase activity	GO:0004721	Molecular Function	2.8026e-45	70%

Full-Lengther Next Prediction

SNPs (tot: 34)

Position	A %	C %	G %	T %	Probability
125		33	66		0.997452
128			66	33	0.997452
131		33	66		0.997452
132	66	33			0.997452
135		66	33		0.997452
138	66			33	0.997452
140	66			33	0.997452
141		33	66		0.997452
147	33			66	0.997452
200		33	66		0.997452
203		33		66	0.997452
207	33			66	0.997452
208		33		66	0.997452
209	66	33			0.997452
210	66			33	0.997452
211	66			33	0.997452
218	66		33		0.997452
220	66	33			0.997452
221	33		66		0.997452
222	66	33			0.997452
223			66	33	0.997452
224		33	66		0.997452
225	33			66	0.997452
329		85	14		0.993533
330	85		14		0.993533
591		58		41	1.0
712		50		50	1.0
738	50		50		1.0
772	75	25			0.996473
777		25		75	0.996473
779			25	75	0.996473
780		75		25	0.996473
782	25		75		0.996473
837			37	62	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain