SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene10544

Length: 929 nt

Origin of reads: Biogeco_1 Biogeco_2 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene10544

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	glycoside hydrolase starch-binding domain-containing protein [Arabidopsis thaliana] gb\|AAL15255.1\| AT5g01260/F7J8_240 [Arabidopsis thaliana] gb\|AAN28796.1\| At5g01260/F7J8_240 [Arabidopsis thaliana]	-	-	8.0e-24	50%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	52%
Blast2go	protein	-	-	1.72981e-27	68%

Source	GOs	Term	Type	e value	Identity
Blast2go	carbohydrate metabolic process	GO:0005975	Biological Process	1.72981e-27	68%
Blast2go	catalytic activity	GO:0003824	Molecular Function	1.72981e-27	68%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Carbohydrate binding module family 20	IPR002044	-	1.72981e-27	68%
Blast2go	Immunoglobulin-like fold	IPR013783	-	1.72981e-27	68%
Blast2go	Carbohydrate-binding-like fold	IPR013784	-	1.72981e-27	68%
Blast2go	Alpha amylase	IPR015902	-	1.72981e-27	68%

Full-Lengther Next Prediction

SSRs (tot: 1)

Start position	End position	Sequence	Length
291	302	CTC CTC CTC CTC	12

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain