SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene10351

Length: 981 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene10351

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	93%
Blast2go	unknown [Picea sitchensis]	-	-	2.09728e-18	97%

Source	GOs	Term	Type	e value	Identity
Blast2go	acetylglucosaminyltransferase activity	GO:0008375	Molecular Function	2.09728e-18	97%
Blast2go	membrane	GO:0016020	Cellular Component	2.09728e-18	97%

Full-Lengther Next Prediction

SNPs (tot: 23)

Position	A %	C %	G %	T %	Probability
254			14	85	0.993533
256		14		85	0.993533
269	85	14			0.993533
270	85			14	0.993533
272			83	16	0.994512
273		33		66	1.0
275		16	83		0.994512
276	16		83		0.994512
319	42		57		1.0
327	42		57		1.0
373		16		83	0.994512
389	50			50	1.0
487		40	60		1.0
532		33		33	0.997753
534	33	66			0.997452
553	60		40		1.0
571	80		20		0.995493
607			33	66	0.997452
608			80	20	0.995493
620	50		50		1.0
656	50		50		1.0
741	28		71		1.0
753		83		16	0.994512

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain