SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene10263

Length: 754 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene10263

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	methyltransferase	-	-	6.0e-25	44%
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	0.0	61%
Blast2go	ribosomal protein l11	-	-	0.0	59%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring one-carbon groups, Methyltransferases.	EC:2.1.1.-	-	0.0	59%

Source	KEGGs	Term	Identity
Blast2go	Ubiquinone and other terpenoid-quinone biosynthesis	00130	59%
Blast2go	Tetracycline biosynthesis	00253	59%
Blast2go	Histidine metabolism	00340	59%
Blast2go	Tyrosine metabolism	00350	59%
Blast2go	Phenylalanine metabolism	00360	59%
Blast2go	Tryptophan metabolism	00380	59%
Blast2go	Benzoxazinoid biosynthesis	00402	59%
Blast2go	Selenocompound metabolism	00450	59%
Blast2go	Biosynthesis of 12-, 14- and 16-membered macrolides	00522	59%
Blast2go	Polycyclic aromatic hydrocarbon degradation	00624	59%
Blast2go	Methane metabolism	00680	59%
Blast2go	Porphyrin and chlorophyll metabolism	00860	59%
Blast2go	Carotenoid biosynthesis	00906	59%
Blast2go	Phenylpropanoid biosynthesis	00940	59%
Blast2go	Flavonoid biosynthesis	00941	59%
Blast2go	Anthocyanin biosynthesis	00942	59%
Blast2go	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	59%
Blast2go	Isoquinoline alkaloid biosynthesis	00950	59%
Blast2go	Insect hormone biosynthesis	00981	59%
Blast2go	Biosynthesis of type II polyketide products	01057	59%
Blast2go	Biosynthesis of alkaloids derived from shikimate pathway	01063	59%
Blast2go	Metabolic pathways	01100	59%
Blast2go	Biosynthesis of secondary metabolites	01110	59%

Source	GOs	Term	Type	e value	Identity
Blast2go	primary metabolic process	GO:0044238	Biological Process	0.0	59%
Blast2go	methyltransferase activity	GO:0008168	Molecular Function	0.0	59%

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
654	66		33		0.997452
656		33		66	0.997452

SSRs (tot: 1)

Start position	End position	Sequence	Length
696	712	TA TA TA TA TA TA TA TA T	17

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain