SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene10262

Length: 690 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene10262

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	1,2-diacylglycerol 3-beta-galactosyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RNS8_RICCO	-	-	73%
FL-Next	sp=Probable monogalactosyldiacylglycerol synthase 1, chloroplastic; Oryza sativa subsp. japonica (Rice).	-	-	71%
Blast2go	mgdg synthase type a	-	-	84%

Source	ECs	Term	Type	e value	Identity
Blast2go	Monogalactosyldiacylglycerol synthase.	EC:2.4.1.46	-	0.0	84%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Glycerolipid metabolism	00561		0.0	84%
Blast2go	Metabolic pathways	01100		0.0	84%

Source	GOs	Term	Type	Identity
Blast2go	carbohydrate metabolic process	GO:0005975	Biological Process	84%
Blast2go	embryo development	GO:0009790	Biological Process	84%
Blast2go	galactolipid biosynthetic process	GO:0019375	Biological Process	84%
Blast2go	thylakoid membrane organization	GO:0010027	Biological Process	84%
Blast2go	lipid glycosylation	GO:0030259	Biological Process	84%
Blast2go	carbohydrate binding	GO:0030246	Molecular Function	84%
Blast2go	1,2-diacylglycerol 3-beta-galactosyltransferase activity	GO:0046509	Molecular Function	84%
Blast2go	chloroplast inner membrane	GO:0009706	Cellular Component	84%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Glycosyl transferase, family 28, C-terminal	IPR007235	-	0.0	84%

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
492		33		66	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain