SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene9817

Length: 1101 nt

Origin of reads: Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene9817

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	myb family transcription factor [Arabidopsis thaliana] gb\|AAD25661.1\| hypothetical protein [Arabidopsis thaliana]	-	-	6.0e-22	63%
FL-Next	sp=Putative Myb family transcription factor At1g14600; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	50%
Blast2go	protein	-	-	1.20917e-28	77%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Myb DNA-binding domain, plants	IPR006447	-	1.20917e-28	77%
Blast2go	Homeodomain-like	IPR009057	-	1.20917e-28	77%
Blast2go	Homeodomain-related	IPR012287	-	1.20917e-28	77%
Blast2go	Myb, DNA-binding	IPR014778	-	1.20917e-28	77%
Blast2go	Myb domain, DNA-binding	IPR017930	-	1.20917e-28	77%

Full-Lengther Next Prediction

SNPs (tot: 56)

Position	A %	C %	G %	T %	Probability
90	25		75		0.996473
93	25	75			0.996473
140	66	33			1.0
143		33	66		1.0
145	66			33	1.0
146	66		33		1.0
147	33			66	1.0
156			66	33	1.0
286	85	14			0.993533
287	85		14		0.993533
290	85		14		0.993533
291	85			14	0.993533
294		14	85		0.993533
296	85			14	0.993533
297	85			14	0.993533
301	85			14	0.993533
303			85	14	0.993533
306		14	85		0.993533
307			85	14	0.993533
308	85	14			0.993533
309	14			85	0.993533
401		80	20		0.995493
404		80		20	0.995493
407		20		80	0.995493
412	80			20	0.995493
413			20	80	0.995493
421		20		80	0.995493
422	20	80			0.995493
436		12		87	0.992554
438	87			12	0.992554
439		12	87		0.992554
440		87	12		0.992554
441	87			12	0.992554
445		12		87	0.992554
446			87	12	0.992554
448		87	12		0.992554
449		87	12		0.992554
450	87	12			0.992554
453			87	12	0.992554
454	87	12			0.992554
559	75			25	1.0
561			25	75	1.0
562	62			25	1.0
563		75	25		1.0
578		25		75	1.0
665	87		12		0.992554
666	87			12	0.992554
668	87		12		0.992554
672	87	12			0.992554
673		12		87	0.992554
676	87		12		0.992554
677			12	87	0.992554
678	87	12			0.992554
681			87	12	0.992554
682		12		87	0.992554
684	87	12			0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain