SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene9678

Length: 342 nt

Origin of reads: Uma

UniGene Fasta

>sp_v1.1_unigene9678
AGTGATTACTATAGCACTTCTATGCATCCAGGGCTCATGGATGCAGCGGCCTGCAATGTCACAGGTTGTGTCAATGTTAACCAACGATTCGGAGAGGATTGTTGAGCCCACACGACCAGCGTTTATAGATGTCGCTGCAGACAGACTCCAGAATTTCACTTCCACGCGAGAATCTGAGACCTATGCTGCTGCTCCATCTCGGACATCTCATGGATCTATCAGCGTCTCTTTACTTCCCCGTTAGTCTAGCGGACCGGCGTTTATAATTTTACAATCTGCATGCTTTGACTGTTATAACTTTTAACGCAGGCAGACCAGGAAGCTTTTGTAAACCAGGACGTT

Ace file of the UniGene sp_v1.1_unigene9678

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Similar to protein kinase n=1 Tax=Triticum aestivum RepID=D8L9R4_WHEAT	-	-	6.0e-05	42%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	58%
Blast2go	unknown [Picea sitchensis]	-	-	3.75732e-16	75%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LLL8

Fln msg: your sequence is shorter than subject: 81 - 245

Fln protein: VITIALLCIQGSWMQRPAMSQVVSMLTNDSERIVEPTRPAFIDVAADRLQNFTSTRESETYAAAPSRTSHGSISVSLLPR*

Protein Length: 82

Fln nts: AGTGATTACTATAGCACTTCTATGCATCCAGGGCTCATGGATGCAGCGGCCTGCAATGTCACAGGTTGTGTCAATGTTAACCAACGATTCGGAGAGGATTGTTGAGCCCACACGACCAGCGTTTATAGATGTCGCTGCAGACAGACTCCAGAATTTCACTTCCACGCGAGAATCTGAGACCTATGCTGCTGCTCCATCTCGGACATCTCATGGATCTATCAGCGTCTCTTTACTTCCCCGTTAG___TCTAGCGGACCGGCGTTTATAATTTTACAATCTGCATGCTTTGACTGTTATAACTTTTAACGCAGGCAGACCAGGAAGCTTTTGTAAACCAGGACGTT

Fln Alignment:

sp_v1.1_unigene9678___VITIALLCIQGSWMQRPAMSQVVSMLTNDSERIVEPTRPAFIDVAADRLQNFTSTRESETYAAAPSRTSHGSISVSLLPR
B8LLL8______________VIRIALLCTQGSWALRPAMSEVVSMLTNNSEITVQPTQPAFIDDSAGKPTDFTTPSDSVNLRSA---SSHGSITVSFVPR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain